*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T. turgidum, Omrabi5 x dicoccoides, QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tt-Oxd-QTL-7A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL [ View Map Set Info ]
Map Name: Tt-Oxd-QTL-7A
Map Start: 0
Map Stop: 136.4
Features by Type:
18 locus
1 qtl
19 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 19 of 19.
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-7A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm332-7A locus 128 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7A Xgwm332-7A locus 157.35 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A Xgwm332-7A locus 76.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7A Xgwm332-7A locus 202.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7A Xgwm332-7A locus 185 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7A Xgwm332-7A locus 178.6 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7A Xgwm332-7A locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7A Xgwm332-7A locus 158.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xgwm332-7A locus 100.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A Xgwm332-7A locus 242.1 () Automated name-based View Maps
Centromere-7A locus 58.7 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7A Centromere-7A locus 107.5 - 111.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-7A Centromere-7A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-7A Centromere-7A locus 0 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-7A Centromere-7A locus 108.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A Centromere-7A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-7A Centromere-7A locus 103.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-7A Centromere-7A locus 99.5 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-7A Centromere-7A locus 83.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7A Centromere-7A locus 160 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-7A Centromere-7A locus 123.1 () Automated name-based View Maps
Wheat ABD - Wheat, 2002, coleoptile color - Wheat-2002-ColeoptileColor-7A Centromere-7A locus 60.9 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-7A Centromere-7A locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-7A Centromere-7A locus 29.3 () Automated name-based View Maps
Xgwm63-7A locus 124.6 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7A Xgwm63-7A locus 204.3 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xgwm63-7A locus 103.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7A Xgwm63-7A locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7A Xgwm63-7A locus 157.3 () Automated name-based View Maps
Xgwm260-7A locus 52.3 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7A Xgwm260-7A locus 118.5 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7A Xgwm260-7A locus -0.22 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-7A Xgwm260-7A locus 70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-7A Xgwm260-7A locus 109.45 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-7A Xgwm260-7A locus 2.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xgwm260-7A locus 70.4 () Automated name-based View Maps
XMcaaEaca185-7A locus 0 No other positions
Xgwm60-7A.2 locus 15.5 No other positions
Xgwm60-7A.1 locus 18.9 No other positions
Xgwm154-7A locus 23.5 No other positions
XMcaaEacg170-7A locus 27.1 No other positions
XMctcEact133-7A locus 47.5 No other positions
XMcagEagc115-7A locus 50.6 No other positions
XMctcEaag160-7A locus 53.7 No other positions
XMcaaEacg198-7A locus 63.6 No other positions
Xgwm276-7A.2 locus 98.1 No other positions
Xgwm276-7A.1 locus 105.9 No other positions
Xgwm282-7A.2 locus 118.6 No other positions
Xgwm282-7A.1 locus 128 No other positions
XMctcEact196-7A locus 136.4 No other positions
Qtw.ica-7AS qtl 15.5 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.