*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-T.dicoccoides, FHB QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tdicoccoides-FHB-QTL-3AS
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - T.dicoccoides, FHB QTL [ View Map Set Info ]
Map Name: Tdicoccoides-FHB-QTL-3AS
Map Start: 0
Map Stop: 155.2
Features by Type:
19 locus
1 qtl
20 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 20 of 20.
Wheat AB - T.dicoccoides, FHB QTL - Tdicoccoides-FHB-QTL-3AS
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo395-3A locus 15.6 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xcdo395-3A locus 18.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Xcdo395-3A locus 21.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo395-3A locus 28.6 () Automated name-based View Maps
Wheat ABD - 3A, CNN x WI - 3A, CNN x WI Xcdo395-3A locus 58.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3A Xcdo395-3A locus -26.5 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xcdo395-3A locus 175 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xcdo395-3A locus 21.6 () Automated name-based View Maps
Xgwm2-3A locus 22.2 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm2-3A locus -0.72 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm2-3A locus 90.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm2-3A locus 54.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm2-3A locus 41.7 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-3A Xgwm2-3A locus 66.3 () Automated name-based View Maps
Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm2-3A locus 45.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xgwm2-3A locus 65.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgwm2-3A locus 44.2 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm2-3A locus 50 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm2-3A locus 37 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A Xgwm2-3A locus 47.7 (cM) Automated name-based View Maps
Wheat ABD - Wheat_Yr79_2018 - Wheat_Yr79_2018-3AL Xgwm2-3A locus 68 (cM) Automated name-based View Maps
Xgwm480-3A locus 122.8 Wheat ABD - Wheat, Sphaerococcoid Genes - Ta-Sphaerococcoid-3A Xgwm480-3A locus 138.6 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3A Xgwm480-3A locus 133.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xgwm480-3A locus 84.1 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A Xgwm480-3A locus 66.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm480-3A locus 115.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm480-3A locus 111.85 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm480-3A locus 0.21 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xgwm480-3A locus 304.5 () Automated name-based View Maps
Xmwg14-3A locus 19.6 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xmwg14-3A locus 35.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xmwg14-3A locus 33 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xmwg14-3A locus 44.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-3A Xmwg14-3A locus -12.5 () Automated name-based View Maps
Xcdo460-3A locus 5.3 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo460-3A locus 16.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-3A Xcdo460-3A locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xcdo460-3A locus 34.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Xcdo460-3A locus 12.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xcdo460-3A locus 6.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xcdo460-3A locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xcdo460-3A locus 32.3 () Automated name-based View Maps
Xbcd1532-3A locus 20.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xbcd1532-3A locus 34.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd1532-3A locus 51.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd1532-3A locus 77.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd1532-3A locus 46.7 () Automated name-based View Maps
Xcdo1435-3A locus 20.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xcdo1435-3A locus 34.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xcdo1435-3A locus 43.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xcdo1435-3A locus 52.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xcdo1435-3A locus 78.3 () Automated name-based View Maps
Xbcd2044-3A locus 67.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd2044-3A locus 76.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A bcd2044 locus 54 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd2044-3A locus 71.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xbcd2044-3A locus 57.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd2044-3A locus 198.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A bcd2044 locus 116.85 (cM) Automated name-based View Maps
Xbcd115-3A locus 67.7 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd115-3A locus 78.8 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xbcd115-3A locus 212 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd115-3A locus 70.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xbcd115-3A locus 58.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-3A Xbcd115-3A locus 74.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd115-3A locus 197.5 () Automated name-based View Maps
Xgwm674-3A locus 41.2 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3A Xgwm674-3A locus 0.21 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-3A Xgwm674-3A locus 132.5 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xgwm674-3A locus 45.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-3A Xgwm674-3A locus -3.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-3A Xgwm674-3A locus 47.8 () Automated name-based View Maps
Xbcd828-3A locus 43.1 Wheat ABD - Wheat, Synthetic x Opata, update - Ta-Synthetic/Opata-update-3A Xbcd828-3A locus 135 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-3A Xbcd828-3A locus 65.6 () Automated name-based View Maps
Wheat ABD - 3A, SxY, QTL - 3A-SxY Xbcd828-3A locus 110 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-3A Xbcd828-3A locus 63 () Automated name-based View Maps
Xclrrb-3A locus 0 No other positions
Xxlrr-3A locus 24.1 No other positions
Xrlk-3A locus 37.8 No other positions
Xclrra-3A locus 41.2 No other positions
Xgwm666a-3A locus 49 No other positions
Xs2as3b-3A locus 110.1 No other positions
Xgwm666b-3A locus 125.1 No other positions
Xs2as3a-3A locus 155.2 No other positions
QFhs.ndsu-3AS qtl 5.2 - 45.1 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.