*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat D-T.tauschii
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Tt-Gill-3D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat D - T.tauschii [ View Map Set Info ]
Map Name: Tt-Gill-3D
Map Start: 0
Map Stop: 675.3
Features by Type:
56 locus
56 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 56.       of 3 | Next
Wheat D - T.tauschii - Tt-Gill-3D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cdo395 locus 141.2 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H cdo395 locus 27 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-2 cdo395 locus 85.9 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg03 CDO395 locus 134.4 () Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-19 cdo395 locus 30.4 () Automated name-based View Maps
Oat - Oat-2002-OxT-QTL - Oat-2002-OxT-QTL_2 cdo395 locus 81.5 (cM) Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H cdo395 locus 5.6 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H cdo395 locus 15.4 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-3 CDO395 locus 134.4 () Automated name-based View Maps
Oat - Oat-2007-OxT-PcQTL - Oat-2007-OxT_2 CDO395 locus 86.6 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H cdo395 locus 30.7 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H cdo395 locus -30.5 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B cdo395 locus 36.23 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-3H cdo395 locus 5.7 () Automated name-based View Maps
Barley - Barley, VGxTP - Hordeum-Giese2-3H cdo395 locus 88 () Automated name-based View Maps
bcd131 locus 400.1 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H bcd131 locus 132.79 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B bcd131 locus 123.43 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H bcd131 locus 139.05 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H bcd131 locus 77.4 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H bcd131 locus 105.4 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H bcd131 locus 160.2 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H bcd131 locus 177.9 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H bcd131 locus 138.6 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H bcd131 locus 129.6 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 bcd131 locus 138.6 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H bcd131 locus 177.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H bcd131 locus 138.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bcd131 locus 144.1 () Automated name-based View Maps
BCD828 locus 222.8 Wheat ABD - 3A, SxY, QTL - 3A-SxY Xbcd828-3A locus 110 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A bcd828 locus 85.76 (cM) Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H BCD828 locus 62.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H BCD828 locus 67.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A bcd828 locus 39.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H BCD828 locus 50.51 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H BCD828 locus 77.8 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H BCD828 locus -0.1 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H BCD828 locus 55.8 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 BCD828 locus 50.35 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H BCD828 locus 51.21 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H BCD828 locus 50.35 () Automated name-based View Maps
Oat - Oat-2013-SxW-RGA - Oat-2013-SxW-RGA_AswI bcd828 locus 2 (cM) Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H BCD828 locus 50.35 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H BCD828 locus 56.1 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H BCD828 locus 42.1 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H BCD828 locus 66 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H BCD828 locus 55.6 () Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-1 BCD828 locus 68.6 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H BCD828 locus 77.8 () Automated name-based View Maps
WG178 locus 229 Barley - Barley, CxH - Hordeum-CxH-3H WG178 locus 54.87 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H WG178 locus 72 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H WG178 locus 8.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H WG178 locus 80.3 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-3H WG178 locus 124.06 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H WG178 locus 50 () Automated name-based View Maps
Barley - Barley, PxN - Hordeum-Heun-3H Xcnl.WG178 locus 124.3 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H WG178 locus 35 () Automated name-based View Maps
ABG380 locus 501.5 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H ABG380 locus 31.84 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-7H ABG380 locus 37.9 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-7H ABG380 locus 65.73 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H ABG380 locus -42.1 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-7H ABG380 locus 37.3 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H ABG380 locus 36.61 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H ABG380 locus 37.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H ABG380 locus 34.78 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H ABG380 locus 34.78 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H ABG380 locus 41.42 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-7H ABG380 locus 0 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-7H ABG380 locus 33.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-7H ABG380 locus 39.3 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-7H ABG380 locus 31.7 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H ABG380 locus 29.19 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-7H ABG380 locus 139.2 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-7H ABG380 locus 33.5 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H ABG380 locus 44.83 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-7H ABG380 locus 33.9 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H ABG380 locus 41.5 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 ABG380 locus 41.42 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-7H ABG380 locus 32.9 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H ABG380 locus 27.56 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-7H ABG380 locus 42.2 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-7H ABG380 locus 38.5 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H ABG380 locus 31.8 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H ABG380 locus 41.42 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-7H ABG380 locus 27.5 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H ABG380 locus 37.8 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-7H ABG380 locus 54.5 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H ABG380-7H locus 49 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-7H ABG380 locus 37.6 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-7H ABG380 locus 32.6 () Automated name-based View Maps
A006 locus 199.9 No other positions
ABG656 locus 675.3 No other positions
BG542b locus 224.7 No other positions
BG933a locus 371 No other positions
BG933b locus 373.2 No other positions
CDO64b locus 245.2 No other positions
CDO388f2 locus 250.1 No other positions
CDO388h locus 286.7 No other positions
CDO388k locus 286.7 No other positions
D018b locus 0 No other positions
D019 locus 322.4 No other positions
E002 locus 207.3 No other positions
E014a locus 420 No other positions
Est-D2 locus 203.8 No other positions
Est-D5 locus 649.8 Wheat ABD - Wheat genes - Triticum-Genes-3D Est-D5 locus 116.9 () Automated name-based View Maps
F034a locus 167.5 No other positions
G013 locus 208.7 No other positions
G036 locus 207.3 No other positions
G048b locus 640.7 No other positions
G053 locus 82.8 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.