*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2014-Consensus-Ug99-Update
(Reference Set) 		Wheat ABD-Wheat, Yr genes and QTL
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2014-Consensus-Ug99-Update Wheat, Yr genes and QTL 3B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
traitlocus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2014-Consensus-Ug99-Update [ View Map Set Info ]
Map Name: Wheat-2014-Consensus-Ug99-Update
Map Start: 0.00
Map Stop: 182.16
Features by Type:
157 locus
1 traitlocus
158 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 158.       of 7 | Next
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wmc471-3B locus 80.11 No other positions
SNPPMOp1526933/1 locus 115.45 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 SNPPMOp1526933/1 locus 115.45 () Automated name-based View Maps
wPt-1804 locus 112.53 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-1804 locus 112.53 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-1804 locus 71.20 () Automated name-based View Maps
SyOpL2491 locus 115.21 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 SyOpL2491 locus 115.21 () Automated name-based View Maps
wPt-5906 locus 108.55 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-5906 locus 66.50 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 3B wPt-5906 locus 46.70 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-5906 locus 108.55 () Automated name-based View Maps
wPt-3107 locus 110.20 Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 5D wPt-3107 locus 80.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wPt-3107 locus 35.80 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-3107 locus 68.60 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6B wPt-3107 locus 66.60 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-3107 locus 110.20 () Automated name-based View Maps
wPt-8096 locus 108.55 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-8096 locus 108.55 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-8096 locus 66.50 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 3B wPt-8096 locus 46.70 () Automated name-based View Maps
wmc291 locus 97.20 Wheat ABD - 3B Physical - Physical-3B wmc291 locus 94.10 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xwmc291 locus 55.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wmc291 locus 65.40 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wmc291 locus 97.20 () Automated name-based View Maps
gwm108-3B locus 97.53 No other positions
wPt-8056 locus 93.53 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-8056 locus 69.90 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-8056 locus 93.53 () Automated name-based View Maps
wPt-5769 locus 93.78 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 3B wPt-5769 locus 155.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-5769 locus 70.10 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-5769 locus 93.78 () Automated name-based View Maps
wPt-9912 locus 93.42 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-9912 locus 66.10 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-9912 locus 93.42 () Automated name-based View Maps
BS00097374 locus 92.98 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3B BS00097374 locus 64.60 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 BS00097374 locus 92.98 () Automated name-based View Maps
barc334-3B locus 91.23 No other positions
wPt-1171 locus 92.23 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6B wPt-1171 locus 60.20 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-1171 locus 92.23 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-1171 locus 65.50 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 3B wPt-1171 locus 43.10 () Automated name-based View Maps
SyOpL2617 locus 92.51 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 SyOpL2617 locus 92.51 () Automated name-based View Maps
BS00105878 locus 88.15 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 BS00105878 locus 88.15 () Automated name-based View Maps
BS00022245 locus 84.75 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 BS00022245 locus 84.75 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3B BS00022245 locus 64.40 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3A BS00022245 locus 59.80 () Automated name-based View Maps
SyOpL1217 locus 85.11 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 SyOpL1217 locus 85.11 () Automated name-based View Maps
wPt-7502 locus 80.11 Wheat ABD - 3B Physical - Physical-3B wPt-7502 locus 62.64 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 3B wPt-7502 locus 33.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-7502 locus 46.70 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-7502 locus 80.11 () Automated name-based View Maps
BS00059417 locus 81.61 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 BS00059417 locus 81.61 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3B BS00059417 locus 62.60 () Automated name-based View Maps
BS00022403 locus 83.80 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 BS00022403 locus 83.80 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3B BS00022403 locus 64.00 () Automated name-based View Maps
wPt-4082 locus 80.11 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-4082 locus 45.20 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-4082 locus 80.11 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B wPt-4082 locus 62.64 () Automated name-based View Maps
wPt-10003 locus 80.11 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-10003 locus 47.40 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-10003 locus 80.11 () Automated name-based View Maps
Wheat ABD - Wheat, UC1110 x PI610750 - Wheat, UC1110 x PI610750 3B wPt-10003 locus 34.00 () Automated name-based View Maps
wmc418-3B locus 80.11 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.