*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM10-Berkut-x-PI9791
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM10-BxPI9791_2A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 [ View Map Set Info ]
Map Name: Wheat-2018-NAM10-BxPI9791_2A
Map Start: 0
Map Stop: 214.2
Features by Type:
1,565 locus
1,565 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 1,565.       of 63 | Next
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
tplb0041b11_529 locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_2A tplb0041b11_529 locus 40.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A tplb0041b11_529 locus 3.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2A tplb0041b11_529 locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_16610-2A locus 0 Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A SpringWheatNAM_tag_16610-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2A SpringWheatNAM_tag_16610-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_16610-2A locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_11534-2A locus 0 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2A SpringWheatNAM_tag_11534-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A SpringWheatNAM_tag_11534-2A locus 2.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A SpringWheatNAM_tag_11534-2A locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_130482-2A locus 0 No other positions
SpringWheatNAM_tag_17193-2A locus 0 Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A SpringWheatNAM_tag_17193-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_17193-2A locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_17193-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A SpringWheatNAM_tag_17193-2A locus 2.9 () Automated name-based View Maps
SpringWheatNAM_tag_5226-2A locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A SpringWheatNAM_tag_5226-2A locus 6.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_5226-2A locus 0.7 () Automated name-based View Maps
SpringWheatNAM_tag_6365-2A locus 0 Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A SpringWheatNAM_tag_6365-2A locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_9970-2A locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_2A SpringWheatNAM_tag_9970-2A locus 46.3 () Automated name-based View Maps
SpringWheatNAM_tag_322081-2A locus 0 No other positions
wsnp_Ex_c2772_5130007 locus 0 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWA3122 locus 4.85 () Automated name-based View Maps
BobWhite_c5756_633 locus 214.2 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2A BobWhite_c5756_633 locus 163.8 () Automated name-based View Maps
Kukri_c365_345 locus 214.2 Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2D Kukri_c365_345 locus 92.5 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB44575 locus 100.81 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A Kukri_c365_345 locus 150.4 () Automated name-based View Maps
IACX7581 locus 214.2 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB36210.1 locus 162.88 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A IACX7581 locus 150.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_2D IACX7581 locus 45.2 () Automated name-based View Maps
SpringWheatNAM_tag_128865-2A locus 214.2 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2A SpringWheatNAM_tag_128865-2A locus 163 () Automated name-based View Maps
SpringWheatNAM_tag_2874-2A locus 214.2 No other positions
SpringWheatNAM_tag_131379-2A locus 214.2 No other positions
SpringWheatNAM_tag_4229-2A locus 214.2 Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2A SpringWheatNAM_tag_4229-2A locus 215 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_4229-2A locus 146.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A SpringWheatNAM_tag_4229-2A locus 153 () Automated name-based View Maps
SpringWheatNAM_tag_51047-2A locus 214.2 No other positions
BS00064055_51 locus 214.2 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2B BS00064055_51 locus 188.9 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB9184 locus 181.92 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_2D BS00064055_51 locus 45.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2D BS00064055_51 locus 92.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_2B BS00064055_51 locus 222 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2B BS00064055_51 locus 176.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_2B BS00064055_51 locus 155 () Automated name-based View Maps
Tdurum_contig42013_538 locus 209.4 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWB70730 locus 179.12 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2A Tdurum_contig42013_538 locus 162.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A Tdurum_contig42013_538 locus 208.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A Tdurum_contig42013_538 locus 146.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A Tdurum_contig42013_538 locus 223 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A Tdurum_contig42013_538 locus 153 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A Tdurum_contig42013_538 locus 189.2 () Automated name-based View Maps
SpringWheatNAM_tag_4508-2A locus 209.4 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_4508-2A locus 146.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A SpringWheatNAM_tag_4508-2A locus 189.2 () Automated name-based View Maps
SpringWheatNAM_tag_2325-2A locus 209.4 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2A SpringWheatNAM_tag_2325-2A locus 163 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A SpringWheatNAM_tag_2325-2A locus 238.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A SpringWheatNAM_tag_2325-2A locus 133.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A SpringWheatNAM_tag_2325-2A locus 165.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2A SpringWheatNAM_tag_2325-2A locus 215 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_2325-2A locus 182.6 () Automated name-based View Maps
SpringWheatNAM_tag_130008-2A locus 209.4 Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A SpringWheatNAM_tag_130008-2A locus 191.4 () Automated name-based View Maps
SpringWheatNAM_tag_130617-2A locus 209.4 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A SpringWheatNAM_tag_130617-2A locus 238.3 () Automated name-based View Maps
SpringWheatNAM_tag_4613-2A locus 209.4 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_2A SpringWheatNAM_tag_4613-2A locus 208.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A SpringWheatNAM_tag_4613-2A locus 153 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2A SpringWheatNAM_tag_4613-2A locus 159.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_2A SpringWheatNAM_tag_4613-2A locus 6.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A SpringWheatNAM_tag_4613-2A locus 189.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2A SpringWheatNAM_tag_4613-2A locus 220.9 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.