*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM10-Berkut-x-PI9791
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM10-BxPI9791_2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 [ View Map Set Info ]
Map Name: Wheat-2018-NAM10-BxPI9791_2D
Map Start: 0
Map Stop: 126.6
Features by Type:
1,089 locus
1,089 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 1,089.       of 44 | Next
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Excalibur_c15031_73 locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2B Excalibur_c15031_73 locus 57.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2B Excalibur_c15031_73 locus 86.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2B Excalibur_c15031_73 locus 93.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2B Excalibur_c15031_73 locus 82.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2B Excalibur_c15031_73 locus 75.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB22543 locus 88.44 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2B Excalibur_c15031_73 locus 70.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2B Excalibur_c15031_73 locus 61.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_2B Excalibur_c15031_73 locus 79.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2B Excalibur_c15031_73 locus 59.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2B Excalibur_c15031_73 locus 139.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2B Excalibur_c15031_73 locus 66.3 () Automated name-based View Maps
RAC875_c24477_456 locus 0 No other positions
Ra_c8723_1839 locus 0 No other positions
Ku_c7139_6930 locus 0 No other positions
BobWhite_c48532_625 locus 0 No other positions
RAC875_c39909_184 locus 0 No other positions
Excalibur_c74304_438 locus 0 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB28708 locus 44.88 () Automated name-based View Maps
D_F1BEJMU02FXGZS_209 locus 0 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB17334 locus 44.88 () Automated name-based View Maps
Ra_c8723_1640 locus 0 No other positions
SpringWheatNAM_tag_2334-2D locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2D SpringWheatNAM_tag_2334-2D locus 19.2 () Automated name-based View Maps
SpringWheatNAM_tag_39780-2D locus 0 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_39780-2D locus 6.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_39780-2D locus 50.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2D SpringWheatNAM_tag_39780-2D locus 12.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2D SpringWheatNAM_tag_39780-2D locus 7.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D SpringWheatNAM_tag_39780-2D locus 87.1 () Automated name-based View Maps
SpringWheatNAM_tag_131603-2D locus 0 No other positions
SpringWheatNAM_tag_225297-2D locus 0 Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2D SpringWheatNAM_tag_225297-2D locus 0.7 () Automated name-based View Maps
RAC875_c8723_54 locus 0 No other positions
BS00066232_51 locus 126.6 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_7B BS00066232_51 locus 154.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D BS00066232_51 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB9754 locus 16.88 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B BS00066232_51 locus 6.9 () Automated name-based View Maps
BS00084371_51 locus 126.6 Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B BS00084371_51 locus 6.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2B BS00084371_51 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2B BS00084371_51 locus 5.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB11364 locus 8.11 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A BS00084371_51 locus 300.9 () Automated name-based View Maps
Excalibur_c42248_211 locus 126.6 Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Excalibur_c42248_211 locus 6.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Excalibur_c42248_211 locus 2.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_2B Excalibur_c42248_211 locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB26313 locus 16.88 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A Excalibur_c42248_211 locus 302.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2B Excalibur_c42248_211 locus 0 () Automated name-based View Maps
Excalibur_c45008_52 locus 126.6 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_2B Excalibur_c45008_52 locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Excalibur_c45008_52 locus 6.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2B Excalibur_c45008_52 locus 5.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_2B Excalibur_c45008_52 locus 100.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Excalibur_c45008_52 locus 2.8 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB26616 locus 16.88 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A Excalibur_c45008_52 locus 302.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2B Excalibur_c45008_52 locus 0 () Automated name-based View Maps
D_GB5Y7FA02ILQ9Z_218 locus 126.6 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A D_GB5Y7FA02ILQ9Z_218 locus 303.7 () Automated name-based View Maps
Tdurum_contig42435_1400 locus 126.6 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A Tdurum_contig42435_1400 locus 302.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_2B Tdurum_contig42435_1400 locus 4.2 () Automated name-based View Maps
RAC875_c1647_1988 locus 126.6 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A RAC875_c1647_1988 locus 302.3 () Automated name-based View Maps
BS00067382_51 locus 126.6 No other positions
Excalibur_c43606_60 locus 126.6 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A Excalibur_c43606_60 locus 302.3 () Automated name-based View Maps
Kukri_c4698_3401 locus 126.6 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A Kukri_c4698_3401 locus 302.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_2A Kukri_c4698_3401 locus 40.9 () Automated name-based View Maps
RAC875_c5718_822 locus 126.6 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2B RAC875_c5718_822 locus 2.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2B RAC875_c5718_822 locus 5.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2B RAC875_c5718_822 locus 8.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2B RAC875_c5718_822 locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_2B RAC875_c5718_822 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2B RAC875_c5718_822 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2B RAC875_c5718_822 locus 4.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2B RAC875_c5718_822 locus 11.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2B RAC875_c5718_822 locus 5.6 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.