*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM15-Berkut-x-CItr7635
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM15-BxCItr7635_4A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 [ View Map Set Info ]
Map Name: Wheat-2018-NAM15-BxCItr7635_4A
Map Start: 0
Map Stop: 133
Features by Type:
3,339 locus
3,339 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 3,339.       of 134 | Next
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_4A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
IAAV2216 locus 4.7 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_4A IAAV2216 locus 2.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_4A IAAV2216 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_4D IAAV2216 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4A IWB34516 locus 8.61 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4A IAAV2216 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4A IAAV2216 locus 4.8 () Automated name-based View Maps
SpringWheatNAM_tag_311263-4A locus 4.7 No other positions
SpringWheatNAM_tag_29361-4A locus 4.7 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4A SpringWheatNAM_tag_29361-4A locus 55.2 () Automated name-based View Maps
SpringWheatNAM_tag_153482-4A locus 4.7 No other positions
SpringWheatNAM_tag_74298-4A locus 4.7 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4A SpringWheatNAM_tag_74298-4A locus 36.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4A SpringWheatNAM_tag_74298-4A locus 49.6 () Automated name-based View Maps
SpringWheatNAM_tag_152994-4A locus 4.7 No other positions
SpringWheatNAM_tag_78122-4A locus 4.7 No other positions
SpringWheatNAM_tag_63296-4A locus 4.7 No other positions
SpringWheatNAM_tag_152499-4A locus 4.7 No other positions
SpringWheatNAM_tag_270291-4A locus 4.7 No other positions
SpringWheatNAM_tag_270247-4A locus 4.7 No other positions
SpringWheatNAM_tag_152865-4A locus 4.7 No other positions
SpringWheatNAM_tag_269426-4A locus 4.7 No other positions
SpringWheatNAM_tag_320164-4A locus 4.7 No other positions
SpringWheatNAM_tag_75924-4A locus 4.7 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4A SpringWheatNAM_tag_75924-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4A SpringWheatNAM_tag_75924-4A locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_153157-4A locus 4.7 No other positions
SpringWheatNAM_tag_40830-4A locus 4.7 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4A SpringWheatNAM_tag_40830-4A locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4A SpringWheatNAM_tag_40830-4A locus 50.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_4A SpringWheatNAM_tag_40830-4A locus 33.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_4A SpringWheatNAM_tag_40830-4A locus 40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4A SpringWheatNAM_tag_40830-4A locus 50.2 () Automated name-based View Maps
SpringWheatNAM_tag_152040-4A locus 4.7 No other positions
SpringWheatNAM_tag_246780-4A locus 4.7 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4A SpringWheatNAM_tag_246780-4A locus 52.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_4A SpringWheatNAM_tag_246780-4A locus 40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4A SpringWheatNAM_tag_246780-4A locus 52.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4A SpringWheatNAM_tag_246780-4A locus 53.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4A SpringWheatNAM_tag_246780-4A locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_4A SpringWheatNAM_tag_246780-4A locus 41 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4A SpringWheatNAM_tag_246780-4A locus 23.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4A SpringWheatNAM_tag_246780-4A locus 50.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_4A SpringWheatNAM_tag_246780-4A locus 33.8 () Automated name-based View Maps
SpringWheatNAM_tag_152558-4A locus 4.7 No other positions
SpringWheatNAM_tag_153517-4A locus 4.7 No other positions
SpringWheatNAM_tag_17538-4A locus 4.7 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4A SpringWheatNAM_tag_17538-4A locus 48.1 () Automated name-based View Maps
SpringWheatNAM_tag_10462-4A locus 4.7 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4A SpringWheatNAM_tag_10462-4A locus 51.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_4A SpringWheatNAM_tag_10462-4A locus 40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4A SpringWheatNAM_tag_10462-4A locus 53.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4A SpringWheatNAM_tag_10462-4A locus 52.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_4A SpringWheatNAM_tag_10462-4A locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4A SpringWheatNAM_tag_10462-4A locus 50.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_4A SpringWheatNAM_tag_10462-4A locus 33.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4A SpringWheatNAM_tag_10462-4A locus 25.8 () Automated name-based View Maps
SpringWheatNAM_tag_75332-4A locus 4.7 No other positions
SpringWheatNAM_tag_55330-4A locus 4.7 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_4A SpringWheatNAM_tag_55330-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_4A SpringWheatNAM_tag_55330-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_4A SpringWheatNAM_tag_55330-4A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4A SpringWheatNAM_tag_55330-4A locus 14 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_4A SpringWheatNAM_tag_55330-4A locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_4A SpringWheatNAM_tag_55330-4A locus 0 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.