*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM15-Berkut-x-CItr7635
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM15-BxCItr7635_5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 [ View Map Set Info ]
Map Name: Wheat-2018-NAM15-BxCItr7635_5B
Map Start: 0.00
Map Stop: 155.90
Features by Type:
2,492 locus
2,492 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 2,492.       of 100 | Next
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_44209-5B locus 0.00 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_44209-5B locus 4.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B SpringWheatNAM_tag_44209-5B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_44209-5B locus 40.50 () Automated name-based View Maps
SpringWheatNAM_tag_26246-5B locus 0.00 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_26246-5B locus 4.30 () Automated name-based View Maps
SpringWheatNAM_tag_23475-5B locus 0.00 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_23475-5B locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B SpringWheatNAM_tag_23475-5B locus 81.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_23475-5B locus 4.30 () Automated name-based View Maps
SpringWheatNAM_tag_26068-5B locus 0.00 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_26068-5B locus 4.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_26068-5B locus 40.50 () Automated name-based View Maps
SpringWheatNAM_tag_64746-5B locus 0.00 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_64746-5B locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5B SpringWheatNAM_tag_64746-5B locus 0.00 () Automated name-based View Maps
SpringWheatNAM_tag_48560-5B locus 0.00 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B SpringWheatNAM_tag_48560-5B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_48560-5B locus 1.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_48560-5B locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5B SpringWheatNAM_tag_48560-5B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_48560-5B locus 5.00 () Automated name-based View Maps
SpringWheatNAM_tag_58400-5B locus 0.00 Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5B SpringWheatNAM_tag_58400-5B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_58400-5B locus 40.50 () Automated name-based View Maps
SpringWheatNAM_tag_25618-5B locus 0.00 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_25618-5B locus 4.30 () Automated name-based View Maps
SpringWheatNAM_tag_332797-5B locus 0.00 No other positions
SpringWheatNAM_tag_27709-5B locus 0.00 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_27709-5B locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_27709-5B locus 4.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B SpringWheatNAM_tag_27709-5B locus 80.50 () Automated name-based View Maps
SpringWheatNAM_tag_42618-5B locus 0.00 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B SpringWheatNAM_tag_42618-5B locus 80.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_42618-5B locus 5.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B SpringWheatNAM_tag_42618-5B locus 0.00 () Automated name-based View Maps
SpringWheatNAM_tag_25363-5B locus 0.00 Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5B SpringWheatNAM_tag_25363-5B locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_25363-5B locus 4.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_25363-5B locus 40.50 () Automated name-based View Maps
SpringWheatNAM_tag_152706-5B locus 0.00 No other positions
SpringWheatNAM_tag_61998-5B locus 0.00 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_61998-5B locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B SpringWheatNAM_tag_61998-5B locus 80.50 () Automated name-based View Maps
SpringWheatNAM_tag_61375-5B locus 0.00 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_61375-5B locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5B SpringWheatNAM_tag_61375-5B locus 0.00 () Automated name-based View Maps
SpringWheatNAM_tag_152509-5B locus 0.00 No other positions
SpringWheatNAM_tag_152326-5B locus 0.00 No other positions
BobWhite_rep_c63710_181 locus 0.00 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB5398 locus 3.89 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B BobWhite_rep_c63710_181 locus 40.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B BobWhite_rep_c63710_181 locus 5.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B BobWhite_rep_c63710_181 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B BobWhite_rep_c63710_181 locus 8.80 () Automated name-based View Maps
wsnp_Ex_c176_347707 locus 155.90 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B wsnp_Ex_c176_347707 locus 242.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B wsnp_Ex_c176_347707 locus 228.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5B wsnp_Ex_c176_347707 locus 144.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B wsnp_Ex_c176_347707 locus 205.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5B wsnp_Ex_c176_347707 locus 211.10 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5B wsnp_Ex_c176_347707 locus 191.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5B wsnp_Ex_c176_347707 locus 170.70 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWA2238 locus 215.71 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_5B wsnp_Ex_c176_347707 locus 307.81 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5B wsnp_Ex_c176_347707 locus 204.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5B wsnp_Ex_c176_347707 locus 193.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B wsnp_Ex_c176_347707 locus 30.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5B wsnp_Ex_c176_347707 locus 212.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_5B wsnp_Ex_c176_347707 locus 170.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5B wsnp_Ex_c176_347707 locus 214.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5B wsnp_Ex_c176_347707 locus 205.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B wsnp_Ex_c176_347707 locus 190.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5B wsnp_Ex_c176_347707 locus 230.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5B wsnp_Ex_c176_347707 locus 172.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B wsnp_Ex_c176_347707 locus 198.60 () Automated name-based View Maps
SpringWheatNAM_tag_151875-5B locus 155.90 No other positions
SpringWheatNAM_tag_75063-5B.2 locus 155.90 No other positions
SpringWheatNAM_tag_75736-5B locus 155.90 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5B SpringWheatNAM_tag_75736-5B locus 204.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5B SpringWheatNAM_tag_75736-5B locus 230.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5B SpringWheatNAM_tag_75736-5B locus 252.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B SpringWheatNAM_tag_75736-5B locus 170.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5B SpringWheatNAM_tag_75736-5B locus 201.10 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_75736-5B locus 230.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5B SpringWheatNAM_tag_75736-5B locus 143.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5B SpringWheatNAM_tag_75736-5B locus 233.10 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5B SpringWheatNAM_tag_75736-5B locus 214.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5B SpringWheatNAM_tag_75736-5B locus 170.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_75736-5B locus 240.90 () Automated name-based View Maps
SpringWheatNAM_tag_60773-5B locus 155.90 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_5B SpringWheatNAM_tag_60773-5B locus 167.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_60773-5B locus 197.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_60773-5B locus 240.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5B SpringWheatNAM_tag_60773-5B locus 230.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5B SpringWheatNAM_tag_60773-5B locus 204.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5B SpringWheatNAM_tag_60773-5B locus 206.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B SpringWheatNAM_tag_60773-5B locus 203.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_60773-5B locus 190.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5B SpringWheatNAM_tag_60773-5B locus 210.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5B SpringWheatNAM_tag_60773-5B locus 170.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5B SpringWheatNAM_tag_60773-5B locus 252.40 () Automated name-based View Maps
SpringWheatNAM_tag_10672-5B locus 155.90 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_10672-5B locus 228.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B SpringWheatNAM_tag_10672-5B locus 170.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5B SpringWheatNAM_tag_10672-5B locus 191.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5B SpringWheatNAM_tag_10672-5B locus 2.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5B SpringWheatNAM_tag_10672-5B locus 202.90 () Automated name-based View Maps
SpringWheatNAM_tag_22464-5B locus 155.90 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5B SpringWheatNAM_tag_22464-5B locus 173.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_22464-5B locus 240.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_22464-5B locus 197.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_22464-5B locus 189.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5B SpringWheatNAM_tag_22464-5B locus 199.10 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B SpringWheatNAM_tag_22464-5B locus 170.60 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.