*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM18-Berkut-x-CItr15144
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM18-BxCItr15144_5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 [ View Map Set Info ]
Map Name: Wheat-2018-NAM18-BxCItr15144_5A
Map Start: 0
Map Stop: 199.9
Features by Type:
1,403 locus
1,403 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 1,403.       Previous | of 57 | Next
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_256640-5A locus 2.1 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5A SpringWheatNAM_tag_256640-5A locus 171.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5A SpringWheatNAM_tag_256640-5A locus 93.5 () Automated name-based View Maps
SpringWheatNAM_tag_89024-5A locus 2.1 No other positions
SpringWheatNAM_tag_190097-5A locus 2.1 No other positions
SpringWheatNAM_tag_272383-5A locus 2.1 No other positions
SpringWheatNAM_tag_162492-5A locus 2.1 No other positions
SpringWheatNAM_tag_161992-5A locus 2.1 No other positions
SpringWheatNAM_tag_272177-5A locus 2.1 No other positions
SpringWheatNAM_tag_48968-5A locus 2.1 No other positions
SpringWheatNAM_tag_38771-5A locus 2.1 Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_38771-5A locus 154.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A SpringWheatNAM_tag_38771-5A locus 161.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A SpringWheatNAM_tag_38771-5A locus 151.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5A SpringWheatNAM_tag_38771-5A locus 137.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_38771-5A locus 166 () Automated name-based View Maps
SpringWheatNAM_tag_252019-5A locus 2.1 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5A SpringWheatNAM_tag_252019-5A locus 176.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A SpringWheatNAM_tag_252019-5A locus 116 () Automated name-based View Maps
SpringWheatNAM_tag_89542-5A locus 2.1 No other positions
SpringWheatNAM_tag_249672-5A locus 2.1 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A SpringWheatNAM_tag_249672-5A locus 125.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_249672-5A locus 166 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_249672-5A locus 154.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_249672-5A locus 161.6 () Automated name-based View Maps
SpringWheatNAM_tag_343652-5A locus 2.1 No other positions
SpringWheatNAM_tag_90962-5A locus 2.1 No other positions
SpringWheatNAM_tag_272385-5A locus 2.1 No other positions
SpringWheatNAM_tag_248102-5A locus 2.1 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A SpringWheatNAM_tag_248102-5A locus 151.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_248102-5A locus 164.5 () Automated name-based View Maps
SpringWheatNAM_tag_93606-5A locus 2.1 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A SpringWheatNAM_tag_93606-5A locus 160.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5A SpringWheatNAM_tag_93606-5A locus 137.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5A SpringWheatNAM_tag_93606-5A locus 152.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_93606-5A locus 161.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A SpringWheatNAM_tag_93606-5A locus 125.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_93606-5A locus 154.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_93606-5A locus 134.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_5A SpringWheatNAM_tag_93606-5A locus 233.45 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A SpringWheatNAM_tag_93606-5A locus 148.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_93606-5A locus 166 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A SpringWheatNAM_tag_93606-5A locus 167 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5A SpringWheatNAM_tag_93606-5A locus 162.8 () Automated name-based View Maps
SpringWheatNAM_tag_162647-5A locus 2.1 No other positions
SpringWheatNAM_tag_90275-5A locus 2.1 No other positions
SpringWheatNAM_tag_38799-5A locus 2.1 Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_38799-5A locus 154.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A SpringWheatNAM_tag_38799-5A locus 161.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_38799-5A locus 161.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A SpringWheatNAM_tag_38799-5A locus 167 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A SpringWheatNAM_tag_38799-5A locus 125.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5A SpringWheatNAM_tag_38799-5A locus 162.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_38799-5A locus 134.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_5A SpringWheatNAM_tag_38799-5A locus 233.45 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A SpringWheatNAM_tag_38799-5A locus 148.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A SpringWheatNAM_tag_38799-5A locus 151.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A SpringWheatNAM_tag_38799-5A locus 132.3 () Automated name-based View Maps
SpringWheatNAM_tag_36462-5A locus 2.1 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A SpringWheatNAM_tag_36462-5A locus 131.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A SpringWheatNAM_tag_36462-5A locus 151.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_36462-5A locus 134.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A SpringWheatNAM_tag_36462-5A locus 161.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_36462-5A locus 154.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A SpringWheatNAM_tag_36462-5A locus 125.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5A SpringWheatNAM_tag_36462-5A locus 139.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5A SpringWheatNAM_tag_36462-5A locus 161.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_36462-5A locus 166 () Automated name-based View Maps
SpringWheatNAM_tag_255106-5A locus 2.1 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A SpringWheatNAM_tag_255106-5A locus 149.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_255106-5A locus 170.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_255106-5A locus 198.9 () Automated name-based View Maps
SpringWheatNAM_tag_162004-5A locus 2.1 No other positions
SpringWheatNAM_tag_272061-5A locus 2.1 No other positions
D_contig04922_546 locus 2.1 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A D_contig04922_546 locus 133 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A D_contig04922_546 locus 148.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5A D_contig04922_546 locus 139.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A D_contig04922_546 locus 135.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A D_contig04922_546 locus 154.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A D_contig04922_546 locus 167.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A D_contig04922_546 locus 151.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5A D_contig04922_546 locus 162.8 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWB15328 locus 99.56 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A D_contig04922_546 locus 125.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A D_contig04922_546 locus 167 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.