*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM2-Berkut-x-PI572692
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM2-BxPI572692_5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 [ View Map Set Info ]
Map Name: Wheat-2018-NAM2-BxPI572692_5B
Map Start: 0
Map Stop: 234.4
Features by Type:
3,758 locus
3,758 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 3,758.       of 151 | Next
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_117303-5B locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_117303-5B locus 32.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5B SpringWheatNAM_tag_117303-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5B SpringWheatNAM_tag_117303-5B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_193786-5B locus 0 No other positions
BS00032003_51 locus 0 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B BS00032003_51 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5B BS00032003_51 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5B BS00032003_51 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB7864 locus 0.43 () Automated name-based View Maps
SpringWheatNAM_tag_92941-5B locus 234.4 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_92941-5B locus 193.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_92941-5B locus 247.5 () Automated name-based View Maps
BS00028106_51 locus 234.4 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5D BS00028106_51 locus 107.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B BS00028106_51 locus 247.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5D BS00028106_51 locus 32.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_5D BS00028106_51 locus 69.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B BS00028106_51 locus 230.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5D BS00028106_51 locus 106.8 () Automated name-based View Maps
SpringWheatNAM_tag_252769-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_252769-5B locus 247.5 () Automated name-based View Maps
SpringWheatNAM_tag_47832-5B locus 234.4 Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5B SpringWheatNAM_tag_47832-5B locus 212.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B SpringWheatNAM_tag_47832-5B locus 203.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_5B SpringWheatNAM_tag_47832-5B locus 172.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5B SpringWheatNAM_tag_47832-5B locus 207.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5B SpringWheatNAM_tag_47832-5B locus 176.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B SpringWheatNAM_tag_47832-5B locus 25.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B SpringWheatNAM_tag_47832-5B locus 175.7 () Automated name-based View Maps
SpringWheatNAM_tag_121461-5B locus 234.4 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_121461-5B locus 193.5 () Automated name-based View Maps
SpringWheatNAM_tag_301280-5B locus 234.4 No other positions
SpringWheatNAM_tag_87421-5B locus 234.4 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_87421-5B locus 230.3 () Automated name-based View Maps
SpringWheatNAM_tag_96293-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_96293-5B locus 247.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_96293-5B locus 230.3 () Automated name-based View Maps
SpringWheatNAM_tag_160622-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_160622-5B locus 247.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_160622-5B locus 230.3 () Automated name-based View Maps
SpringWheatNAM_tag_194487-5B locus 234.4 No other positions
SpringWheatNAM_tag_93623-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_93623-5B locus 247.5 () Automated name-based View Maps
SpringWheatNAM_tag_301209-5B locus 234.4 No other positions
SpringWheatNAM_tag_92722-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_92722-5B locus 247.5 () Automated name-based View Maps
SpringWheatNAM_tag_159904-5B locus 234.4 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_159904-5B locus 230.3 () Automated name-based View Maps
SpringWheatNAM_tag_253011-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_253011-5B locus 247.5 () Automated name-based View Maps
SpringWheatNAM_tag_86368-5B locus 234.4 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5B SpringWheatNAM_tag_86368-5B locus 230.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_86368-5B locus 193.5 () Automated name-based View Maps
SpringWheatNAM_tag_253206-5B locus 234.4 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_253206-5B locus 247.5 () Automated name-based View Maps
SpringWheatNAM_tag_300451-5B locus 234.4 No other positions
SpringWheatNAM_tag_44702-5B locus 234.4 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5B SpringWheatNAM_tag_44702-5B locus 28.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5B SpringWheatNAM_tag_44702-5B locus 247.5 () Automated name-based View Maps
SpringWheatNAM_tag_121619-5B locus 234.4 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_121619-5B locus 193.5 () Automated name-based View Maps
SpringWheatNAM_tag_194244-5B locus 234.4 No other positions
SpringWheatNAM_tag_193300-5B locus 234.4 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B SpringWheatNAM_tag_193300-5B locus 193.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.