*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM24-Berkut-x-PI192147
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM24-BxPI192147_5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 [ View Map Set Info ]
Map Name: Wheat-2018-NAM24-BxPI192147_5D
Map Start: 0
Map Stop: 181.2
Features by Type:
342 locus
342 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 342.       Previous | of 14 | Next
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_110512-5D locus 44.1 No other positions
SpringWheatNAM_tag_10001-5D locus 44.1 No other positions
SpringWheatNAM_tag_916-5D locus 44.1 No other positions
SpringWheatNAM_tag_174018-5D locus 44.1 No other positions
SpringWheatNAM_tag_61763-5D locus 44.1 No other positions
SpringWheatNAM_tag_12115-5D locus 44.1 No other positions
SpringWheatNAM_tag_252168-5D locus 44.1 No other positions
SpringWheatNAM_tag_71811-5D locus 44.1 No other positions
SpringWheatNAM_tag_81931-5D.1 locus 44.1 No other positions
SpringWheatNAM_tag_162050-5D locus 44.1 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5D SpringWheatNAM_tag_162050-5D locus 213.6 () Automated name-based View Maps
SpringWheatNAM_tag_62340-5D locus 44.1 No other positions
SpringWheatNAM_tag_250755-5D locus 44.1 No other positions
SpringWheatNAM_tag_3404-5D locus 44.1 No other positions
SpringWheatNAM_tag_256010-5D locus 44.1 No other positions
SpringWheatNAM_tag_13823-5D locus 44.1 No other positions
wsnp_Ra_c17216_26044790 locus 44.1 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_5A wsnp_Ra_c17216_26044790 locus 114.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A wsnp_Ra_c17216_26044790 locus 115.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5A wsnp_Ra_c17216_26044790 locus 202.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWA7665 locus 76.81 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A wsnp_Ra_c17216_26044790 locus 95 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A wsnp_Ra_c17216_26044790 locus 113.8 () Automated name-based View Maps
BS00110075_51 locus 44.1 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A BS00110075_51 locus 115.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5A BS00110075_51 locus 202.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWB12467 locus 76.81 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_5A BS00110075_51 locus 114.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A BS00110075_51 locus 95 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A BS00110075_51 locus 113.8 () Automated name-based View Maps
BS00022215_51 locus 44.1 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A BS00022215_51 locus 113.8 () Automated name-based View Maps
Excalibur_c45853_1161 locus 44.1 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A Excalibur_c45853_1161 locus 113.8 () Automated name-based View Maps
SpringWheatNAM_tag_631-5D locus 44.1 No other positions
SpringWheatNAM_tag_4645-5D locus 44.1 No other positions
SpringWheatNAM_tag_24601-5D locus 45.5 No other positions
SpringWheatNAM_tag_87485-5D locus 45.5 No other positions
SpringWheatNAM_tag_62366-5D locus 45.5 No other positions
SpringWheatNAM_tag_28474-5D locus 45.5 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.