*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM25-Berkut-x-CItr15134
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM25-BxCItr15134_4B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 [ View Map Set Info ]
Map Name: Wheat-2018-NAM25-BxCItr15134_4B
Map Start: 0
Map Stop: 129.7
Features by Type:
990 locus
990 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 990.       of 40 | Next
Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 - Wheat-2018-NAM25-BxCItr15134_4B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wsnp_Ku_c12399_20037334 locus 0 Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B wsnp_Ku_c12399_20037334 locus 2.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B wsnp_Ku_c12399_20037334 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4B wsnp_Ku_c12399_20037334 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4B wsnp_Ku_c12399_20037334 locus 0 () Automated name-based View Maps
RAC875_c86104_111 locus 0 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4B RAC875_c86104_111 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4B RAC875_c86104_111 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4B RAC875_c86104_111 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4B RAC875_c86104_111 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B RAC875_c86104_111 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B RAC875_c86104_111 locus 2.1 () Automated name-based View Maps
Excalibur_rep_c85960_323 locus 1.5 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4B Excalibur_rep_c85960_323 locus 0.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4B Excalibur_rep_c85960_323 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B Excalibur_rep_c85960_323 locus 3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4B Excalibur_rep_c85960_323 locus 3.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4B Excalibur_rep_c85960_323 locus 2.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4B Excalibur_rep_c85960_323 locus 2.8 () Automated name-based View Maps
SpringWheatNAM_tag_318108-4B locus 1.5 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4B SpringWheatNAM_tag_318108-4B locus 2.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_318108-4B locus 8.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4B SpringWheatNAM_tag_318108-4B locus 2.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B SpringWheatNAM_tag_318108-4B locus 0.7 () Automated name-based View Maps
SpringWheatNAM_tag_52799-4B locus 1.5 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4B SpringWheatNAM_tag_52799-4B locus 8.2 () Automated name-based View Maps
SpringWheatNAM_tag_288088-4B locus 1.5 No other positions
SpringWheatNAM_tag_183041-4B locus 1.5 No other positions
SpringWheatNAM_tag_33432-4B locus 1.5 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4B SpringWheatNAM_tag_33432-4B locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_33432-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4B SpringWheatNAM_tag_33432-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4B SpringWheatNAM_tag_33432-4B locus 4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4B SpringWheatNAM_tag_33432-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4B SpringWheatNAM_tag_33432-4B locus 0.7 () Automated name-based View Maps
SpringWheatNAM_tag_72006-4B locus 1.5 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_72006-4B locus 3 () Automated name-based View Maps
SpringWheatNAM_tag_40078-4B locus 1.5 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4B SpringWheatNAM_tag_40078-4B locus 3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B SpringWheatNAM_tag_40078-4B locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_40078-4B locus 3.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4B SpringWheatNAM_tag_40078-4B locus 2.1 () Automated name-based View Maps
SpringWheatNAM_tag_72186-4B locus 1.5 No other positions
SpringWheatNAM_tag_113511-4B locus 1.5 No other positions
SpringWheatNAM_tag_71516-4B locus 1.5 Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B SpringWheatNAM_tag_71516-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_71516-4B locus 3 () Automated name-based View Maps
SpringWheatNAM_tag_74515-4B locus 1.5 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4B SpringWheatNAM_tag_74515-4B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_286360-4B locus 1.5 No other positions
SpringWheatNAM_tag_15326-4B locus 1.5 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4B SpringWheatNAM_tag_15326-4B locus 2.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_4B SpringWheatNAM_tag_15326-4B locus 1.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_4B SpringWheatNAM_tag_15326-4B locus 3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_4B SpringWheatNAM_tag_15326-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4B SpringWheatNAM_tag_15326-4B locus 4.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_4B SpringWheatNAM_tag_15326-4B locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B SpringWheatNAM_tag_15326-4B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4B SpringWheatNAM_tag_15326-4B locus 7.5 () Automated name-based View Maps
SpringWheatNAM_tag_247402-4B locus 1.5 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_4B SpringWheatNAM_tag_247402-4B locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_4B SpringWheatNAM_tag_247402-4B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_10167-4B locus 1.5 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_4B SpringWheatNAM_tag_10167-4B locus 4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_4B SpringWheatNAM_tag_10167-4B locus 2.1 () Automated name-based View Maps
SpringWheatNAM_tag_286739-4B locus 1.5 No other positions
SpringWheatNAM_tag_287244-4B locus 1.5 No other positions
SpringWheatNAM_tag_110801-4B locus 1.5 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_110801-4B locus 3 () Automated name-based View Maps
SpringWheatNAM_tag_17180-4B locus 1.5 No other positions
SpringWheatNAM_tag_287285-4B locus 1.5 No other positions
SpringWheatNAM_tag_111097-4B locus 1.5 No other positions
SpringWheatNAM_tag_120575-4B locus 1.5 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_4B SpringWheatNAM_tag_120575-4B locus 3 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.