*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM25-Berkut-x-CItr15134
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM25-BxCItr15134_5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 [ View Map Set Info ]
Map Name: Wheat-2018-NAM25-BxCItr15134_5A
Map Start: 0
Map Stop: 229
Features by Type:
2,464 locus
2,464 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 2,464.       of 99 | Next
Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 - Wheat-2018-NAM25-BxCItr15134_5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
TA001188-1298 locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5A TA001188-1298 locus 15.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A TA001188-1298 locus 12.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_5A TA001188-1298 locus 16.1 () Automated name-based View Maps
SpringWheatNAM_tag_311630-5A locus 0 No other positions
SpringWheatNAM_tag_20650-5A locus 0 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5A SpringWheatNAM_tag_20650-5A locus 13 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A SpringWheatNAM_tag_20650-5A locus 13.5 () Automated name-based View Maps
SpringWheatNAM_tag_113133-5A locus 0 No other positions
SpringWheatNAM_tag_341842-5A locus 0 No other positions
SpringWheatNAM_tag_181837-5A locus 0 No other positions
SpringWheatNAM_tag_79971-5A locus 0 No other positions
SpringWheatNAM_tag_114677-5A locus 0 No other positions
SpringWheatNAM_tag_286042-5A locus 0 No other positions
SpringWheatNAM_tag_112901-5A locus 0 No other positions
SpringWheatNAM_tag_286569-5A locus 0 No other positions
SpringWheatNAM_tag_181594-5A locus 0 No other positions
SpringWheatNAM_tag_29629-5A locus 0 No other positions
SpringWheatNAM_tag_323244-5A locus 0 No other positions
SpringWheatNAM_tag_286039-5A locus 0 No other positions
SpringWheatNAM_tag_182088-5A locus 0 No other positions
SpringWheatNAM_tag_314493-5A locus 0 No other positions
SpringWheatNAM_tag_180101-5A locus 0 No other positions
SpringWheatNAM_tag_287636-5A locus 0 No other positions
SpringWheatNAM_tag_286109-5A locus 0 No other positions
SpringWheatNAM_tag_311622-5A locus 0 No other positions
SpringWheatNAM_tag_322230-5A locus 0 No other positions
SpringWheatNAM_tag_178386-5A locus 0 No other positions
SpringWheatNAM_tag_72696-5A locus 0 No other positions
SpringWheatNAM_tag_342144-5A locus 0 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.