*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM25-Berkut-x-CItr15134
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM25-BxCItr15134_6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 [ View Map Set Info ]
Map Name: Wheat-2018-NAM25-BxCItr15134_6B
Map Start: 0
Map Stop: 125.6
Features by Type:
5,384 locus
5,384 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 5,384.       of 216 | Next
Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 - Wheat-2018-NAM25-BxCItr15134_6B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Kukri_c6364_758 locus 0 No other positions
SpringWheatNAM_tag_86804-6B locus 0 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6B SpringWheatNAM_tag_86804-6B locus 17.1 () Automated name-based View Maps
SpringWheatNAM_tag_6109-6B locus 0 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6B SpringWheatNAM_tag_6109-6B locus 7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_6109-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_6109-6B locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6B SpringWheatNAM_tag_6109-6B locus 7.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_6109-6B locus 9.2 () Automated name-based View Maps
SpringWheatNAM_tag_178696-6B locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_178696-6B locus 13.7 () Automated name-based View Maps
SpringWheatNAM_tag_318125-6B locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_318125-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_318125-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_318125-6B locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_6B SpringWheatNAM_tag_318125-6B locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6B SpringWheatNAM_tag_318125-6B locus 7 () Automated name-based View Maps
SpringWheatNAM_tag_181225-6B locus 0 No other positions
SpringWheatNAM_tag_47790-6B locus 0 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_6B SpringWheatNAM_tag_47790-6B locus 12.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_47790-6B locus 8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6B SpringWheatNAM_tag_47790-6B locus 7.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6B SpringWheatNAM_tag_47790-6B locus 15.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_47790-6B locus 9.9 () Automated name-based View Maps
SpringWheatNAM_tag_182452-6B locus 0 No other positions
SpringWheatNAM_tag_311623-6B locus 0 No other positions
SpringWheatNAM_tag_287611-6B locus 0 No other positions
SpringWheatNAM_tag_182155-6B locus 0 No other positions
SpringWheatNAM_tag_144948-6B locus 0 No other positions
SpringWheatNAM_tag_9280-6B locus 0 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_6B SpringWheatNAM_tag_9280-6B locus 140.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_9280-6B locus 128.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_6B SpringWheatNAM_tag_9280-6B locus 118.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_9280-6B locus 95.6 () Automated name-based View Maps
SpringWheatNAM_tag_180856-6B locus 0 No other positions
SpringWheatNAM_tag_45810-6B locus 0 Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_6B SpringWheatNAM_tag_45810-6B locus 10.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_45810-6B locus 10.2 () Automated name-based View Maps
SpringWheatNAM_tag_7249-6B locus 0 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_7249-6B locus 99.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_7249-6B locus 129.9 () Automated name-based View Maps
SpringWheatNAM_tag_180642-6B locus 0 No other positions
SpringWheatNAM_tag_50842-6B locus 0 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6B SpringWheatNAM_tag_50842-6B locus 7.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_50842-6B locus 8.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6B SpringWheatNAM_tag_50842-6B locus 15.7 () Automated name-based View Maps
SpringWheatNAM_tag_16180-6B locus 0 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6B SpringWheatNAM_tag_16180-6B locus 7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6B SpringWheatNAM_tag_16180-6B locus 7.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_16180-6B locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_6B SpringWheatNAM_tag_16180-6B locus 7.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6B SpringWheatNAM_tag_16180-6B locus 6.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_16180-6B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_61862-6B locus 0 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6B SpringWheatNAM_tag_61862-6B locus 7.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6B SpringWheatNAM_tag_61862-6B locus 15.7 () Automated name-based View Maps
SpringWheatNAM_tag_66181-6B locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_66181-6B locus 131.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_6B SpringWheatNAM_tag_66181-6B locus 116.7 () Automated name-based View Maps
SpringWheatNAM_tag_13304-6B locus 0 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_13304-6B locus 4.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6B SpringWheatNAM_tag_13304-6B locus 7.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6B SpringWheatNAM_tag_13304-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6B SpringWheatNAM_tag_13304-6B locus 7.1 () Automated name-based View Maps
SpringWheatNAM_tag_7164-6B locus 0 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6B SpringWheatNAM_tag_7164-6B locus 90.6 () Automated name-based View Maps
SpringWheatNAM_tag_102835-6B locus 0 No other positions
SpringWheatNAM_tag_180538-6B locus 0 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.