*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM27-Berkut-x-PI192569
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM27-BxPI192569_6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 [ View Map Set Info ]
Map Name: Wheat-2018-NAM27-BxPI192569_6A
Map Start: 0
Map Stop: 199.6
Features by Type:
2,146 locus
2,146 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 2,146.       of 86 | Next
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Excalibur_c3076_1127 locus 0 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB25019 locus 153.08 () Automated name-based View Maps
SpringWheatNAM_tag_78442-6A locus 0 No other positions
SpringWheatNAM_tag_78848-6A locus 0 No other positions
SpringWheatNAM_tag_71970-6A locus 0 No other positions
SpringWheatNAM_tag_91183-6A locus 0 No other positions
SpringWheatNAM_tag_253296-6A locus 0 No other positions
SpringWheatNAM_tag_105875-6A locus 0 No other positions
SpringWheatNAM_tag_128654-6A locus 0 No other positions
SpringWheatNAM_tag_293840-6A locus 0 No other positions
SpringWheatNAM_tag_250749-6A locus 0 No other positions
SpringWheatNAM_tag_66106-6A locus 0 No other positions
SpringWheatNAM_tag_93601-6A locus 0 No other positions
SpringWheatNAM_tag_71728-6A locus 0 No other positions
SpringWheatNAM_tag_66272-6A locus 0 No other positions
SpringWheatNAM_tag_79635-6A locus 0 No other positions
SpringWheatNAM_tag_224625-6A locus 0 No other positions
SpringWheatNAM_tag_78609-6A locus 0 No other positions
SpringWheatNAM_tag_69020-6A locus 0 No other positions
SpringWheatNAM_tag_293711-6A locus 0 No other positions
SpringWheatNAM_tag_4891-6A locus 0 No other positions
SpringWheatNAM_tag_96912-6A locus 0 No other positions
SpringWheatNAM_tag_293073-6A locus 0 No other positions
SpringWheatNAM_tag_67589-6A locus 0 No other positions
SpringWheatNAM_tag_97393-6A locus 0 No other positions
wsnp_BE471213D_Ta_2_1 locus 0 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D wsnp_BE471213D_Ta_2_1 locus 146.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6D wsnp_BE471213D_Ta_2_1 locus 87.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_6D wsnp_BE471213D_Ta_2_1 locus 69.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_6D wsnp_BE471213D_Ta_2_1 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6D wsnp_BE471213D_Ta_2_1 locus 154.3 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWA203 locus 153.08 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.