*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM28-Berkut-x-PI210945
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM28-BxPI210945_7B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 [ View Map Set Info ]
Map Name: Wheat-2018-NAM28-BxPI210945_7B
Map Start: 0
Map Stop: 142
Features by Type:
3,260 locus
3,260 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 3,260.       of 131 | Next
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_7B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Excalibur_c37696_192 locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B Excalibur_c37696_192 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B Excalibur_c37696_192 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B Excalibur_c37696_192 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B Excalibur_c37696_192 locus 1.6 () Automated name-based View Maps
SpringWheatNAM_tag_74699-7B locus 0 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_7B SpringWheatNAM_tag_74699-7B locus 6.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_7B SpringWheatNAM_tag_74699-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B SpringWheatNAM_tag_74699-7B locus 8.9 () Automated name-based View Maps
SpringWheatNAM_tag_118537-7B locus 0 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B SpringWheatNAM_tag_118537-7B locus 1.4 () Automated name-based View Maps
SpringWheatNAM_tag_84874-7B locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B SpringWheatNAM_tag_84874-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B SpringWheatNAM_tag_84874-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B SpringWheatNAM_tag_84874-7B locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_84874-7B locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B SpringWheatNAM_tag_84874-7B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_337342-7B locus 0 No other positions
SpringWheatNAM_tag_113007-7B locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_113007-7B locus 1.6 () Automated name-based View Maps
SpringWheatNAM_tag_119622-7B locus 0 Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_7B SpringWheatNAM_tag_119622-7B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_253975-7B locus 0 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B SpringWheatNAM_tag_253975-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_253975-7B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_84658-7B locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B SpringWheatNAM_tag_84658-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_84658-7B locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B SpringWheatNAM_tag_84658-7B locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B SpringWheatNAM_tag_84658-7B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_190248-7B locus 0 No other positions
SpringWheatNAM_tag_85619-7B locus 0 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B SpringWheatNAM_tag_85619-7B locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B SpringWheatNAM_tag_85619-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_85619-7B locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B SpringWheatNAM_tag_85619-7B locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_85294-7B locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_85294-7B locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B SpringWheatNAM_tag_85294-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B SpringWheatNAM_tag_85294-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B SpringWheatNAM_tag_85294-7B locus 1.4 () Automated name-based View Maps
SpringWheatNAM_tag_296577-7B locus 0 No other positions
SpringWheatNAM_tag_72995-7B locus 0 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_7B SpringWheatNAM_tag_72995-7B locus 6.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_7B SpringWheatNAM_tag_72995-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM25-Berkut-x-CItr15134 - Wheat-2018-NAM25-BxCItr15134_7B SpringWheatNAM_tag_72995-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B SpringWheatNAM_tag_72995-7B locus 8.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_7B SpringWheatNAM_tag_72995-7B locus 67.24 () Automated name-based View Maps
SpringWheatNAM_tag_189421-7B locus 0 No other positions
Excalibur_c15405_808 locus 0 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B Excalibur_c15405_808 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B Excalibur_c15405_808 locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B Excalibur_c15405_808 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_7B IWB22624 locus 3.27 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B Excalibur_c15405_808 locus 1.6 () Automated name-based View Maps
RAC875_c17182_600 locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B RAC875_c17182_600 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_7B IWB54418 locus 3.27 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B RAC875_c17182_600 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_7B RAC875_c17182_600 locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_85633-7B locus 0 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B SpringWheatNAM_tag_85633-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B SpringWheatNAM_tag_85633-7B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B SpringWheatNAM_tag_85633-7B locus 1.6 () Automated name-based View Maps
Kukri_rep_c71778_644 locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B Kukri_rep_c71778_644 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_7B IWB50142 locus 3.27 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B Kukri_rep_c71778_644 locus 0 () Automated name-based View Maps
Tdurum_contig11531_522 locus 0 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_7B IWB67142 locus 3.27 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B Tdurum_contig11531_522 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B Tdurum_contig11531_522 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B Tdurum_contig11531_522 locus 0 () Automated name-based View Maps
GENE-2935_850 locus 0 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B GENE-2935_850 locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B GENE-2935_850 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B GENE-2935_850 locus 192.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B GENE-2935_850 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B GENE-2935_850 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B GENE-2935_850 locus 0 () Automated name-based View Maps
GENE-2935_114 locus 0 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5B GENE-2935_114 locus 192.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B GENE-2935_114 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B GENE-2935_114 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B GENE-2935_114 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B GENE-2935_114 locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7B GENE-2935_114 locus 0 () Automated name-based View Maps
Kukri_c3734_892 locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7B Kukri_c3734_892 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5B Kukri_c3734_892 locus 207.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B Kukri_c3734_892 locus 175 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7B Kukri_c3734_892 locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7B Kukri_c3734_892 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7B Kukri_c3734_892 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_7B IWB44681 locus 3.27 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5B Kukri_c3734_892 locus 203.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5B Kukri_c3734_892 locus 238.2 () Automated name-based View Maps
RFL_Contig6075_618 locus 1.5 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-7B IWB65212 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_7B RFL_Contig6075_618 locus 59.34 () Automated name-based View Maps
Kukri_c542_1538 locus 1.5 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-7B IWB46416 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_7B Kukri_c542_1538 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_7B Kukri_c542_1538 locus 59.34 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.