*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM3-Berkut-x-PI283147
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM3-BxPI283147_6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 [ View Map Set Info ]
Map Name: Wheat-2018-NAM3-BxPI283147_6D
Map Start: 0
Map Stop: 227.4
Features by Type:
282 locus
282 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 282.       Previous | of 12 | Next
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_124363-6D.1 locus 68.4 No other positions
SpringWheatNAM_tag_197709-6D locus 68.4 No other positions
SpringWheatNAM_tag_119890-6D locus 68.4 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_119890-6D locus 136.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_6D SpringWheatNAM_tag_119890-6D locus 101.5 () Automated name-based View Maps
SpringWheatNAM_tag_338917-6D locus 68.4 No other positions
SpringWheatNAM_tag_120009-6D locus 68.4 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_120009-6D locus 166.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_120009-6D locus 137.5 () Automated name-based View Maps
RAC875_c9905_691 locus 69.1 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_6B RAC875_c9905_691 locus 141.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_6B RAC875_c9905_691 locus 187.8 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6B IWB61268 locus 113.67 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6B RAC875_c9905_691 locus 94.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_6B RAC875_c9905_691 locus 105.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_6B RAC875_c9905_691 locus 121.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6A RAC875_c9905_691 locus 113.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6D RAC875_c9905_691 locus 51.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D RAC875_c9905_691 locus 62.3 () Automated name-based View Maps
SpringWheatNAM_tag_198491-6D locus 69.1 No other positions
SpringWheatNAM_tag_305950-6D locus 69.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_305950-6D locus 166.9 () Automated name-based View Maps
SpringWheatNAM_tag_129152-6D locus 69.1 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_129152-6D locus 62.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_129152-6D locus 167.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_129152-6D locus 133 () Automated name-based View Maps
SpringWheatNAM_tag_118017-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_118017-6D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_118017-6D locus 62.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_118017-6D locus 162.4 () Automated name-based View Maps
SpringWheatNAM_tag_119988-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_119988-6D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_119988-6D locus 62.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_119988-6D locus 167.6 () Automated name-based View Maps
SpringWheatNAM_tag_117674-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_117674-6D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_117674-6D locus 166.9 () Automated name-based View Maps
SpringWheatNAM_tag_199481-6D locus 69.1 No other positions
SpringWheatNAM_tag_124363-6D.2 locus 69.1 No other positions
SpringWheatNAM_tag_325844-6D locus 69.1 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_325844-6D locus 62.3 () Automated name-based View Maps
SpringWheatNAM_tag_120010-6D.2 locus 69.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_120010-6D.2 locus 169.7 () Automated name-based View Maps
SpringWheatNAM_tag_128654-6D locus 69.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_128654-6D locus 167.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_128654-6D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_128654-6D locus 62.3 () Automated name-based View Maps
SpringWheatNAM_tag_257965-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_257965-6D locus 137.5 () Automated name-based View Maps
SpringWheatNAM_tag_257846-6D locus 69.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_257846-6D locus 167.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_257846-6D locus 137.5 () Automated name-based View Maps
SpringWheatNAM_tag_299249-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_299249-6D locus 137.5 () Automated name-based View Maps
SpringWheatNAM_tag_199027-6D locus 69.1 No other positions
SpringWheatNAM_tag_257806-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_257806-6D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_257806-6D locus 167.6 () Automated name-based View Maps
SpringWheatNAM_tag_120796-6D locus 69.1 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_120796-6D locus 137.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_120796-6D locus 62.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_120796-6D locus 167.6 () Automated name-based View Maps
SpringWheatNAM_tag_120665-6D locus 69.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_120665-6D locus 167.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_6D SpringWheatNAM_tag_120665-6D locus 101.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_120665-6D locus 137.5 () Automated name-based View Maps
SpringWheatNAM_tag_129840-6D locus 69.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_129840-6D locus 167.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_129840-6D locus 62.3 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.