*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM30-Berkut-x-PI278297
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM30-BxPI278297_2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 [ View Map Set Info ]
Map Name: Wheat-2018-NAM30-BxPI278297_2D
Map Start: 0.00
Map Stop: 108.50
Features by Type:
857 locus
857 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 857.       of 35 | Next
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BobWhite_rep_c51612_864 locus 0.00 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB4966 locus 41.07 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D BobWhite_rep_c51612_864 locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D BobWhite_rep_c51612_864 locus 47.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D BobWhite_rep_c51612_864 locus 56.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D BobWhite_rep_c51612_864 locus 5.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D BobWhite_rep_c51612_864 locus 36.00 () Automated name-based View Maps
SpringWheatNAM_tag_304543-2D locus 0.00 No other positions
Kukri_rep_c72558_961 locus 0.00 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D Kukri_rep_c72558_961 locus 5.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D Kukri_rep_c72558_961 locus 36.00 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB50203 locus 42.59 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D Kukri_rep_c72558_961 locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D Kukri_rep_c72558_961 locus 56.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D Kukri_rep_c72558_961 locus 47.30 () Automated name-based View Maps
RAC875_rep_c103893_601 locus 0.00 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D RAC875_rep_c103893_601 locus 56.50 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB61359 locus 41.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D RAC875_rep_c103893_601 locus 47.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D RAC875_rep_c103893_601 locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D RAC875_rep_c103893_601 locus 5.30 () Automated name-based View Maps
RAC875_c26896_339 locus 0.00 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D RAC875_c26896_339 locus 5.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D RAC875_c26896_339 locus 36.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D RAC875_c26896_339 locus 56.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D RAC875_c26896_339 locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D RAC875_c26896_339 locus 47.30 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB56002 locus 41.20 () Automated name-based View Maps
IAAV1002 locus 0.00 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB34311 locus 41.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D IAAV1002 locus 47.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D IAAV1002 locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D IAAV1002 locus 5.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D IAAV1002 locus 56.50 () Automated name-based View Maps
SpringWheatNAM_tag_68633-2D locus 0.00 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_68633-2D locus 47.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D SpringWheatNAM_tag_68633-2D locus 56.50 () Automated name-based View Maps
RAC875_rep_c72220_143 locus 0.70 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB62848 locus 43.14 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D RAC875_rep_c72220_143 locus 78.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D RAC875_rep_c72220_143 locus 48.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D RAC875_rep_c72220_143 locus 5.30 () Automated name-based View Maps
SpringWheatNAM_tag_118370-2D locus 0.70 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D SpringWheatNAM_tag_118370-2D locus 76.70 () Automated name-based View Maps
SpringWheatNAM_tag_195305-2D locus 0.70 No other positions
SpringWheatNAM_tag_48055-2D locus 0.70 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_48055-2D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D SpringWheatNAM_tag_48055-2D locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_48055-2D locus 50.10 () Automated name-based View Maps
SpringWheatNAM_tag_53272-2D locus 0.70 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_53272-2D locus 6.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D SpringWheatNAM_tag_53272-2D locus 78.20 () Automated name-based View Maps
SpringWheatNAM_tag_44053-2D locus 0.70 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D SpringWheatNAM_tag_44053-2D locus 36.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D SpringWheatNAM_tag_44053-2D locus 56.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_44053-2D locus 43.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D SpringWheatNAM_tag_44053-2D locus 76.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_44053-2D locus 5.30 () Automated name-based View Maps
SpringWheatNAM_tag_302966-2D locus 0.70 No other positions
SpringWheatNAM_tag_66829-2D locus 0.70 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D SpringWheatNAM_tag_66829-2D locus 56.50 () Automated name-based View Maps
SpringWheatNAM_tag_195289-2D locus 0.70 No other positions
SpringWheatNAM_tag_52083-2D locus 0.70 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_52083-2D locus 6.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_52083-2D locus 48.70 () Automated name-based View Maps
SpringWheatNAM_tag_42955-2D locus 0.70 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2D SpringWheatNAM_tag_42955-2D locus 56.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_42955-2D locus 5.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D SpringWheatNAM_tag_42955-2D locus 36.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_42955-2D locus 48.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D SpringWheatNAM_tag_42955-2D locus 76.70 () Automated name-based View Maps
SpringWheatNAM_tag_342020-2D locus 0.70 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_342020-2D locus 43.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D SpringWheatNAM_tag_342020-2D locus 36.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_342020-2D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2D SpringWheatNAM_tag_342020-2D locus 3.50 () Automated name-based View Maps
SpringWheatNAM_tag_249773-2D locus 0.70 Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_249773-2D locus 6.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_249773-2D locus 48.70 () Automated name-based View Maps
SpringWheatNAM_tag_252078-2D locus 0.70 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_2D SpringWheatNAM_tag_252078-2D locus 76.70 () Automated name-based View Maps
SpringWheatNAM_tag_196267-2D locus 0.70 No other positions
SpringWheatNAM_tag_93225-2D locus 0.70 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_93225-2D locus 49.40 () Automated name-based View Maps
SpringWheatNAM_tag_196518-2D locus 0.70 No other positions
SpringWheatNAM_tag_274737-2D locus 0.70 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_274737-2D locus 48.70 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.