*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM5-Berkut-x-PI382150
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM5-BxPI382150_2A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 [ View Map Set Info ]
Map Name: Wheat-2018-NAM5-BxPI382150_2A
Map Start: 0
Map Stop: 175.3
Features by Type:
2,489 locus
2,489 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 2,489.       of 100 | Next
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_93407-2A locus 0 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2A SpringWheatNAM_tag_93407-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_2A SpringWheatNAM_tag_93407-2A locus 46.3 () Automated name-based View Maps
SpringWheatNAM_tag_207742-2A locus 0 No other positions
SpringWheatNAM_tag_57872-2A locus 0 Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_57872-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_57872-2A locus 3 () Automated name-based View Maps
SpringWheatNAM_tag_211794-2A locus 0 Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_211794-2A locus 2.9 () Automated name-based View Maps
SpringWheatNAM_tag_48030-2A locus 0 No other positions
SpringWheatNAM_tag_37784-2A locus 0 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2A SpringWheatNAM_tag_37784-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2A SpringWheatNAM_tag_37784-2A locus 3.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A SpringWheatNAM_tag_37784-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_37784-2A locus 2.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2A SpringWheatNAM_tag_37784-2A locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_37784-2A locus 2.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_37784-2A locus 3 () Automated name-based View Maps
SpringWheatNAM_tag_184127-2A locus 0 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_2A SpringWheatNAM_tag_184127-2A locus 40.9 () Automated name-based View Maps
SpringWheatNAM_tag_106740-2A locus 0 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_106740-2A locus 3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_106740-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_2A SpringWheatNAM_tag_106740-2A locus 43.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A SpringWheatNAM_tag_106740-2A locus 7.5 () Automated name-based View Maps
SpringWheatNAM_tag_343793-2A locus 0 No other positions
SpringWheatNAM_tag_18461-2A locus 0 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_2A SpringWheatNAM_tag_18461-2A locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A SpringWheatNAM_tag_18461-2A locus 7.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2A SpringWheatNAM_tag_18461-2A locus 3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_18461-2A locus 1.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_18461-2A locus 2.7 () Automated name-based View Maps
SpringWheatNAM_tag_342687-2A locus 0 No other positions
SpringWheatNAM_tag_170836-2A locus 0 Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_170836-2A locus 0 () Automated name-based View Maps
Excalibur_c28710_340 locus 175.3 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A Excalibur_c28710_340 locus 180.9 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWB24746.1 locus 162.89 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A Excalibur_c28710_340 locus 161.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Excalibur_c28710_340 locus 164.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A Excalibur_c28710_340 locus 214.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A Excalibur_c28710_340 locus 131.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Excalibur_c28710_340 locus 205.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A Excalibur_c28710_340 locus 168.7 () Automated name-based View Maps
Kukri_rep_c110277_268 locus 175.3 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A Kukri_rep_c110277_268 locus 168.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2B Kukri_rep_c110277_268 locus 162.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2B Kukri_rep_c110277_268 locus 187.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2B Kukri_rep_c110277_268 locus 233.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Kukri_rep_c110277_268 locus 164 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Kukri_rep_c110277_268 locus 205.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2B Kukri_rep_c110277_268 locus 150.5 () Automated name-based View Maps
Excalibur_c25781_232 locus 175.3 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Excalibur_c25781_232 locus 164.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A Excalibur_c25781_232 locus 180.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D Excalibur_c25781_232 locus 73.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Excalibur_c25781_232 locus 205.2 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2B IWB24368.1 locus 173.35 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A Excalibur_c25781_232 locus 213.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A Excalibur_c25781_232 locus 161.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A Excalibur_c25781_232 locus 184.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A Excalibur_c25781_232 locus 214.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A Excalibur_c25781_232 locus 131.1 () Automated name-based View Maps
Kukri_c1947_715 locus 175.3 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWB42142 locus 162.89 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Kukri_c1947_715 locus 205.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A Kukri_c1947_715 locus 161.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Kukri_c1947_715 locus 164.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A Kukri_c1947_715 locus 168.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A Kukri_c1947_715 locus 213.4 () Automated name-based View Maps
Ex_c3115_2742 locus 175.3 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWB20466.1 locus 162.89 () Automated name-based View Maps
Excalibur_c1999_1178 locus 175.3 Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2B Excalibur_c1999_1178 locus 205.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_2B Excalibur_c1999_1178 locus 164.7 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWB23406 locus 162.89 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A Excalibur_c1999_1178 locus 213.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A Excalibur_c1999_1178 locus 215.4 () Automated name-based View Maps
Excalibur_c97347_55 locus 175.3 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D Excalibur_c97347_55 locus 73.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2D Excalibur_c97347_55 locus 52.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2D Excalibur_c97347_55 locus 104.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2D Excalibur_c97347_55 locus 146.5 () Automated name-based View Maps
SpringWheatNAM_tag_70898-2A locus 175.3 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A SpringWheatNAM_tag_70898-2A locus 180.9 () Automated name-based View Maps
SpringWheatNAM_tag_36635-2A locus 175.3 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_36635-2A locus 213.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A SpringWheatNAM_tag_36635-2A locus 180.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A SpringWheatNAM_tag_36635-2A locus 214.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_36635-2A locus 184.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A SpringWheatNAM_tag_36635-2A locus 161.7 () Automated name-based View Maps
SpringWheatNAM_tag_39807-2A locus 175.3 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_39807-2A locus 213.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_39807-2A locus 189 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_2A SpringWheatNAM_tag_39807-2A locus 203.8 () Automated name-based View Maps
SpringWheatNAM_tag_38858-2A locus 175.3 Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A SpringWheatNAM_tag_38858-2A locus 131.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2A SpringWheatNAM_tag_38858-2A locus 168.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A SpringWheatNAM_tag_38858-2A locus 180.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A SpringWheatNAM_tag_38858-2A locus 161.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_38858-2A locus 184.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_38858-2A locus 213.4 () Automated name-based View Maps
SpringWheatNAM_tag_208072-2A locus 175.3 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A SpringWheatNAM_tag_208072-2A locus 180.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A SpringWheatNAM_tag_208072-2A locus 131.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_208072-2A locus 184.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_208072-2A locus 213.4 () Automated name-based View Maps
SpringWheatNAM_tag_35750-2A locus 175.3 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_2A SpringWheatNAM_tag_35750-2A locus 161.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_2A SpringWheatNAM_tag_35750-2A locus 180.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2A SpringWheatNAM_tag_35750-2A locus 131.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2A SpringWheatNAM_tag_35750-2A locus 213.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2A SpringWheatNAM_tag_35750-2A locus 184.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2A SpringWheatNAM_tag_35750-2A locus 214.7 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.