*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM5-Berkut-x-PI382150
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM5-BxPI382150_5A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 [ View Map Set Info ]
Map Name: Wheat-2018-NAM5-BxPI382150_5A
Map Start: 0.00
Map Stop: 249.50
Features by Type:
3,849 locus
3,849 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 3,849.       of 154 | Next
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wsnp_Ex_c3620_6612294 locus 2.90 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A wsnp_Ex_c3620_6612294 locus 63.20 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWA3567 locus 15.86 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A wsnp_Ex_c3620_6612294 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A wsnp_Ex_c3620_6612294 locus 5.90 () Automated name-based View Maps
SpringWheatNAM_tag_121642-5A locus 2.90 Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5A SpringWheatNAM_tag_121642-5A locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A SpringWheatNAM_tag_121642-5A locus 64.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_121642-5A locus 4.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A SpringWheatNAM_tag_121642-5A locus 0.00 () Automated name-based View Maps
SpringWheatNAM_tag_117895-5A locus 2.90 Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5A SpringWheatNAM_tag_117895-5A locus 96.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_117895-5A locus 4.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A SpringWheatNAM_tag_117895-5A locus 63.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_117895-5A locus 4.50 () Automated name-based View Maps
SpringWheatNAM_tag_57151-5A locus 2.90 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_57151-5A locus 4.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A SpringWheatNAM_tag_57151-5A locus 63.20 () Automated name-based View Maps
SpringWheatNAM_tag_55083-5A locus 2.90 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_55083-5A locus 4.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_55083-5A locus 4.40 () Automated name-based View Maps
SpringWheatNAM_tag_212537-5A locus 2.90 No other positions
SpringWheatNAM_tag_126491-5A locus 2.90 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A SpringWheatNAM_tag_126491-5A locus 64.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A SpringWheatNAM_tag_126491-5A locus 13.20 () Automated name-based View Maps
SpringWheatNAM_tag_213339-5A locus 2.90 No other positions
SpringWheatNAM_tag_213458-5A locus 2.90 No other positions
SpringWheatNAM_tag_216551-5A locus 2.90 No other positions
IAAV1538 locus 2.90 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_5A IAAV1538 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5A IAAV1538 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5A IAAV1538 locus 2.10 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A IAAV1538 locus 2.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5A IAAV1538 locus 1.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5A IAAV1538 locus 7.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A IAAV1538 locus 1.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A IAAV1538 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A IAAV1538 locus 2.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5A IAAV1538 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5A IAAV1538 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A IAAV1538 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5A IAAV1538 locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5A IAAV1538 locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A IAAV1538 locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A IAAV1538 locus 4.50 () Automated name-based View Maps
wsnp_JD_c2128_2930150 locus 2.90 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWA5923 locus 15.86 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A wsnp_JD_c2128_2930150 locus 5.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A wsnp_JD_c2128_2930150 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A wsnp_JD_c2128_2930150 locus 63.20 () Automated name-based View Maps
wsnp_Ex_c3620_6612231 locus 2.90 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A wsnp_Ex_c3620_6612231 locus 5.90 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWA3566 locus 15.86 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A wsnp_Ex_c3620_6612231 locus 63.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A wsnp_Ex_c3620_6612231 locus 0.00 () Automated name-based View Maps
SpringWheatNAM_tag_210712-5A locus 2.90 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A SpringWheatNAM_tag_210712-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5A SpringWheatNAM_tag_210712-5A locus 92.60 () Automated name-based View Maps
SpringWheatNAM_tag_40891-5A locus 2.90 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_40891-5A locus 4.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A SpringWheatNAM_tag_40891-5A locus 64.80 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_40891-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A SpringWheatNAM_tag_40891-5A locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5A SpringWheatNAM_tag_40891-5A locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5A SpringWheatNAM_tag_40891-5A locus 92.60 () Automated name-based View Maps
SpringWheatNAM_tag_57844-5A locus 2.90 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_57844-5A locus 4.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5A SpringWheatNAM_tag_57844-5A locus 63.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5A SpringWheatNAM_tag_57844-5A locus 92.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5A SpringWheatNAM_tag_57844-5A locus 0.70 () Automated name-based View Maps
Excalibur_c22465_625 locus 4.40 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A Excalibur_c22465_625 locus 2.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5A Excalibur_c22465_625 locus 3.60 () Automated name-based View Maps
SpringWheatNAM_tag_339789-5A locus 4.40 No other positions
SpringWheatNAM_tag_212654-5A locus 4.40 No other positions
BS00099534_51 locus 4.40 Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_5A BS00099534_51 locus 3.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5A BS00099534_51 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A BS00099534_51 locus 2.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A BS00099534_51 locus 6.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A BS00099534_51 locus 2.10 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_5A BS00099534_51 locus 8.44 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A BS00099534_51 locus 3.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_5A BS00099534_51 locus 2.10 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWB12074 locus 16.62 () Automated name-based View Maps
Kukri_c95189_124 locus 5.80 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5A IWB48405 locus 3.12 () Automated name-based View Maps
SpringWheatNAM_tag_4720-5A locus 5.80 Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5A SpringWheatNAM_tag_4720-5A locus 15.50 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5A SpringWheatNAM_tag_4720-5A locus 13.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_4720-5A locus 9.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5A SpringWheatNAM_tag_4720-5A locus 9.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5A SpringWheatNAM_tag_4720-5A locus 98.60 () Automated name-based View Maps
SpringWheatNAM_tag_78065-5A locus 5.80 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5A SpringWheatNAM_tag_78065-5A locus 110.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_78065-5A locus 13.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5A SpringWheatNAM_tag_78065-5A locus 13.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5A SpringWheatNAM_tag_78065-5A locus 13.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A SpringWheatNAM_tag_78065-5A locus 9.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5A SpringWheatNAM_tag_78065-5A locus 0.00 () Automated name-based View Maps
SpringWheatNAM_tag_321460-5A locus 5.80 Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_5A SpringWheatNAM_tag_321460-5A locus 15.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_321460-5A locus 11.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5A SpringWheatNAM_tag_321460-5A locus 102.90 () Automated name-based View Maps
SpringWheatNAM_tag_37976-5A locus 5.80 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_5A SpringWheatNAM_tag_37976-5A locus 11.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5A SpringWheatNAM_tag_37976-5A locus 95.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A SpringWheatNAM_tag_37976-5A locus 2.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5A SpringWheatNAM_tag_37976-5A locus 5.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_5A SpringWheatNAM_tag_37976-5A locus 3.50 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.