*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM5-Berkut-x-PI382150
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM5-BxPI382150_5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 [ View Map Set Info ]
Map Name: Wheat-2018-NAM5-BxPI382150_5D
Map Start: 0
Map Stop: 49.2
Features by Type:
216 locus
216 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 216.       of 9 | Next
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_5D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
RAC875_c92929_92 locus 3 Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5D RAC875_c92929_92 locus 53.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5D IWB61072 locus 72.28 () Automated name-based View Maps
SpringWheatNAM_tag_90850-5D locus 3 Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_5D SpringWheatNAM_tag_90850-5D locus 32.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5D SpringWheatNAM_tag_90850-5D locus 1.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5D SpringWheatNAM_tag_90850-5D locus 42.6 () Automated name-based View Maps
SpringWheatNAM_tag_33684-5D locus 3 No other positions
SpringWheatNAM_tag_5281-5D locus 3 Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_5D SpringWheatNAM_tag_5281-5D locus 4.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_5D SpringWheatNAM_tag_5281-5D locus 42.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5D SpringWheatNAM_tag_5281-5D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5D SpringWheatNAM_tag_5281-5D locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5D SpringWheatNAM_tag_5281-5D locus 41.7 () Automated name-based View Maps
SpringWheatNAM_tag_170636-5D locus 3 No other positions
SpringWheatNAM_tag_315513-5D locus 3 No other positions
SpringWheatNAM_tag_215101-5D locus 3 No other positions
SpringWheatNAM_tag_215490-5D locus 3 No other positions
SpringWheatNAM_tag_209154-5D locus 3 No other positions
SpringWheatNAM_tag_218107-5D locus 3 No other positions
SpringWheatNAM_tag_312160-5D locus 3 No other positions
SpringWheatNAM_tag_218655-5D locus 3 No other positions
SpringWheatNAM_tag_218249-5D locus 3 No other positions
SpringWheatNAM_tag_90997-5D locus 3 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5D SpringWheatNAM_tag_90997-5D locus 42.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5D SpringWheatNAM_tag_90997-5D locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_5D SpringWheatNAM_tag_90997-5D locus 17.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5D SpringWheatNAM_tag_90997-5D locus 13.9 () Automated name-based View Maps
SpringWheatNAM_tag_53650-5D locus 3 No other positions
SpringWheatNAM_tag_215291-5D locus 3 No other positions
SpringWheatNAM_tag_214362-5D locus 3 No other positions
SpringWheatNAM_tag_211924-5D locus 3 No other positions
SpringWheatNAM_tag_127217-5D locus 3 No other positions
SpringWheatNAM_tag_16918-5D locus 3 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_5D SpringWheatNAM_tag_16918-5D locus 13.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_5D SpringWheatNAM_tag_16918-5D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_5D SpringWheatNAM_tag_16918-5D locus 7.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5D SpringWheatNAM_tag_16918-5D locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5D SpringWheatNAM_tag_16918-5D locus 46.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5D SpringWheatNAM_tag_16918-5D locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_5D SpringWheatNAM_tag_16918-5D locus 40.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5D SpringWheatNAM_tag_16918-5D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_5D SpringWheatNAM_tag_16918-5D locus 53.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_5D SpringWheatNAM_tag_16918-5D locus 42.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_5D SpringWheatNAM_tag_16918-5D locus 3.7 () Automated name-based View Maps
SpringWheatNAM_tag_76269-5D locus 3 No other positions
SpringWheatNAM_tag_118893-5D locus 3 No other positions
SpringWheatNAM_tag_209244-5D locus 3 No other positions
SpringWheatNAM_tag_218518-5D locus 3 No other positions
SpringWheatNAM_tag_84222-5D locus 3 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.