*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM6-Berkut-x-PI470817
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM6-BxPI470817_1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 [ View Map Set Info ]
Map Name: Wheat-2018-NAM6-BxPI470817_1B
Map Start: 0
Map Stop: 189.6
Features by Type:
3,999 locus
3,999 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 3,999.       of 160 | Next
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_221513-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_221513-1B locus 12.2 () Automated name-based View Maps
SpringWheatNAM_tag_125142-1B locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_1B SpringWheatNAM_tag_125142-1B locus 52.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_125142-1B locus 12.2 () Automated name-based View Maps
SpringWheatNAM_tag_219219-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_219219-1B locus 12.2 () Automated name-based View Maps
SpringWheatNAM_tag_133393-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_133393-1B locus 12.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_133393-1B locus 58.2 () Automated name-based View Maps
SpringWheatNAM_tag_224219-1B locus 0 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_1B SpringWheatNAM_tag_224219-1B locus 44.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_224219-1B locus 58.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_1B SpringWheatNAM_tag_224219-1B locus 29.3 () Automated name-based View Maps
SpringWheatNAM_tag_238980-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_238980-1B locus 8.7 () Automated name-based View Maps
IAAV5858 locus 0 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B IAAV5858 locus 56.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B IAAV5858 locus 9.4 () Automated name-based View Maps
SpringWheatNAM_tag_125421-1B locus 0 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_125421-1B locus 57.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_125421-1B locus 12.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_1B SpringWheatNAM_tag_125421-1B locus 52.5 () Automated name-based View Maps
RAC875_c98832_52 locus 0 No other positions
SpringWheatNAM_tag_125136-1B locus 0 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_125136-1B locus 57.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_1B SpringWheatNAM_tag_125136-1B locus 52.5 () Automated name-based View Maps
BS00062757_51 locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_2A BS00062757_51 locus 106.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2A BS00062757_51 locus 112.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_2A BS00062757_51 locus 89.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2A BS00062757_51 locus 82.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6A IWB8917 locus 27.15 () Automated name-based View Maps
TA001559-0515 locus 0 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_1B TA001559-0515 locus 42 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B TA001559-0515 locus 58.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_1B TA001559-0515 locus 29.3 () Automated name-based View Maps
SpringWheatNAM_tag_76682-1B locus 0 No other positions
SpringWheatNAM_tag_224249-1B locus 0 No other positions
SpringWheatNAM_tag_133175-1B locus 0 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_133175-1B locus 56.8 () Automated name-based View Maps
SpringWheatNAM_tag_13356-1B locus 0 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_1B SpringWheatNAM_tag_13356-1B locus 206.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_13356-1B locus 48.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_1B SpringWheatNAM_tag_13356-1B locus 27.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_13356-1B locus 8.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_1B SpringWheatNAM_tag_13356-1B locus 35.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_1B SpringWheatNAM_tag_13356-1B locus 36.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_1B SpringWheatNAM_tag_13356-1B locus 48.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_1B SpringWheatNAM_tag_13356-1B locus 44.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_1B SpringWheatNAM_tag_13356-1B locus 43.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_1B SpringWheatNAM_tag_13356-1B locus 37.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_1B SpringWheatNAM_tag_13356-1B locus 37.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_1B SpringWheatNAM_tag_13356-1B locus 25.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_1B SpringWheatNAM_tag_13356-1B locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_1B SpringWheatNAM_tag_13356-1B locus 27.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_1B SpringWheatNAM_tag_13356-1B locus 2.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_1B SpringWheatNAM_tag_13356-1B locus 44.8 () Automated name-based View Maps
SpringWheatNAM_tag_127482-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_127482-1B locus 12.2 () Automated name-based View Maps
SpringWheatNAM_tag_219429-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_219429-1B locus 12.2 () Automated name-based View Maps
SpringWheatNAM_tag_125673-1B locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_1B SpringWheatNAM_tag_125673-1B locus 52.5 () Automated name-based View Maps
SpringWheatNAM_tag_118951-1B locus 0 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_1B SpringWheatNAM_tag_118951-1B locus 48.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_1B SpringWheatNAM_tag_118951-1B locus 48.6 () Automated name-based View Maps
SpringWheatNAM_tag_205574-1B locus 0 No other positions
SpringWheatNAM_tag_228606-1B locus 0 No other positions
SpringWheatNAM_tag_115036-1B locus 0 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_1B SpringWheatNAM_tag_115036-1B locus 31.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_115036-1B locus 12.2 () Automated name-based View Maps
SpringWheatNAM_tag_222238-1B locus 0 No other positions
SpringWheatNAM_tag_23787-1B locus 0 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_1B SpringWheatNAM_tag_23787-1B locus 12.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_1B SpringWheatNAM_tag_23787-1B locus 57.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.