*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM6-Berkut-x-PI470817
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM6-BxPI470817_6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 [ View Map Set Info ]
Map Name: Wheat-2018-NAM6-BxPI470817_6A
Map Start: 0
Map Stop: 153.1
Features by Type:
1,843 locus
1,843 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 1,843.       of 74 | Next
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_2739-6A locus 0 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6A SpringWheatNAM_tag_2739-6A locus 116 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6A SpringWheatNAM_tag_2739-6A locus 166.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6A SpringWheatNAM_tag_2739-6A locus 92.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6A SpringWheatNAM_tag_2739-6A locus 125.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6A SpringWheatNAM_tag_2739-6A locus 153.5 () Automated name-based View Maps
Ra_c3533_880 locus 0 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6A IWB51908 locus 122.34 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6A Ra_c3533_880 locus 92.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6A Ra_c3533_880 locus 150.9 () Automated name-based View Maps
SpringWheatNAM_tag_30761-6A locus 0 Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_6A SpringWheatNAM_tag_30761-6A locus 208.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6A SpringWheatNAM_tag_30761-6A locus 137 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_6A SpringWheatNAM_tag_30761-6A locus 112 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM23-Berkut-x-PI192001 - Wheat-2018-NAM23-BxPI192001_6A SpringWheatNAM_tag_30761-6A locus 109.2 () Automated name-based View Maps
SpringWheatNAM_tag_10352-6A locus 0 Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6A SpringWheatNAM_tag_10352-6A locus 151.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6A SpringWheatNAM_tag_10352-6A locus 92.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6A SpringWheatNAM_tag_10352-6A locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_6A SpringWheatNAM_tag_10352-6A locus 112 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6A SpringWheatNAM_tag_10352-6A locus 116 () Automated name-based View Maps
SpringWheatNAM_tag_224690-6A locus 0 No other positions
SpringWheatNAM_tag_102162-6A locus 0 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6A SpringWheatNAM_tag_102162-6A locus 165.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6A SpringWheatNAM_tag_102162-6A locus 123.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_6A SpringWheatNAM_tag_102162-6A locus 132 () Automated name-based View Maps
SpringWheatNAM_tag_16041-6A locus 0 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6A SpringWheatNAM_tag_16041-6A locus 114.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6A SpringWheatNAM_tag_16041-6A locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6A SpringWheatNAM_tag_16041-6A locus 153.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6A SpringWheatNAM_tag_16041-6A locus 168.9 () Automated name-based View Maps
SpringWheatNAM_tag_14728-6A locus 0 Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6A SpringWheatNAM_tag_14728-6A locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6A SpringWheatNAM_tag_14728-6A locus 116 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6A SpringWheatNAM_tag_14728-6A locus 151.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6A SpringWheatNAM_tag_14728-6A locus 92.8 () Automated name-based View Maps
SpringWheatNAM_tag_194-6A locus 0 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_6A SpringWheatNAM_tag_194-6A locus 112 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6A SpringWheatNAM_tag_194-6A locus 92.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6A SpringWheatNAM_tag_194-6A locus 166.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6A SpringWheatNAM_tag_194-6A locus 116 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6A SpringWheatNAM_tag_194-6A locus 125.8 () Automated name-based View Maps
Kukri_c6128_373 locus 153.1 Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6B Kukri_c6128_373 locus 112.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6B Kukri_c6128_373 locus 58.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_6B Kukri_c6128_373 locus 57.5 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6B IWB46924 locus 73.42 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_6B Kukri_c6128_373 locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_6B Kukri_c6128_373 locus 76.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_6B Kukri_c6128_373 locus 87.4 () Automated name-based View Maps
RAC875_c1349_270 locus 153.1 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6B RAC875_c1349_270 locus 67.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_6B RAC875_c1349_270 locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_6B RAC875_c1349_270 locus 87.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6B IWB53728 locus 73.42 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_6B RAC875_c1349_270 locus 76.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6B RAC875_c1349_270 locus 112.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6B RAC875_c1349_270 locus 58.4 () Automated name-based View Maps
Kukri_c1836_1167 locus 153.1 Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_6B Kukri_c1836_1167 locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6B Kukri_c1836_1167 locus 112.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM28-Berkut-x-PI210945 - Wheat-2018-NAM28-BxPI210945_6B Kukri_c1836_1167 locus 76.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6B Kukri_c1836_1167 locus 58.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_6B Kukri_c1836_1167 locus 57.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_6B Kukri_c1836_1167 locus 88.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6B IWB41949 locus 73.42 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6B Kukri_c1836_1167 locus 67.7 () Automated name-based View Maps
SpringWheatNAM_tag_12587-6A locus 153.1 No other positions
SpringWheatNAM_tag_67255-6A locus 153.1 No other positions
SpringWheatNAM_tag_33935-6A locus 153.1 No other positions
SpringWheatNAM_tag_74805-6A locus 153.1 No other positions
SpringWheatNAM_tag_222850-6A locus 153.1 No other positions
SpringWheatNAM_tag_219214-6A locus 153.1 No other positions
SpringWheatNAM_tag_230701-6A locus 153.1 No other positions
SpringWheatNAM_tag_225460-6A locus 153.1 No other positions
SpringWheatNAM_tag_64753-6A locus 153.1 No other positions
SpringWheatNAM_tag_68192-6A locus 153.1 No other positions
SpringWheatNAM_tag_20053-6A locus 153.1 No other positions
SpringWheatNAM_tag_121057-6A locus 153.1 No other positions
GENE-3807_45 locus 153.1 Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_6B GENE-3807_45 locus 87.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_6B GENE-3807_45 locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6B IWB33616 locus 73.42 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6B GENE-3807_45 locus 58.4 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.