*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM6-Berkut-x-PI470817
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM6-BxPI470817_7D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 [ View Map Set Info ]
Map Name: Wheat-2018-NAM6-BxPI470817_7D
Map Start: 0
Map Stop: 175.1
Features by Type:
4,618 locus
4,618 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 4,618.       of 185 | Next
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_7D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Tdurum_contig93100_640 locus 31.1 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_4A IWB73843.1 locus 127.12 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_7D Tdurum_contig93100_640 locus 15.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_7D Tdurum_contig93100_640 locus 11.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7D Tdurum_contig93100_640 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_7D Tdurum_contig93100_640 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7D Tdurum_contig93100_640 locus 30.3 () Automated name-based View Maps
SpringWheatNAM_tag_218937-7D locus 31.1 No other positions
RAC875_c39217_314 locus 31.1 Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_7D RAC875_c39217_314 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_7D RAC875_c39217_314 locus 15.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_7D RAC875_c39217_314 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6D RAC875_c39217_314 locus 136.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7D RAC875_c39217_314 locus 30.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_7D RAC875_c39217_314 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_7D RAC875_c39217_314 locus 101.8 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_7D IWB57490 locus 33.48 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_7D RAC875_c39217_314 locus 110.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_7D RAC875_c39217_314 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_7D RAC875_c39217_314 locus 104.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_7D RAC875_c39217_314 locus 11.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_7D RAC875_c39217_314 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_7D RAC875_c39217_314 locus 19.8 () Automated name-based View Maps
BobWhite_rep_c51103_654 locus 31.1 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_7D BobWhite_rep_c51103_654 locus 15.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_7D BobWhite_rep_c51103_654 locus 30.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_7A BobWhite_rep_c51103_654 locus 12.3 () Automated name-based View Maps
SpringWheatNAM_tag_219601-7D locus 36.8 No other positions
SpringWheatNAM_tag_340483-7D locus 36.8 No other positions
SpringWheatNAM_tag_101048-7D locus 36.8 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_7D SpringWheatNAM_tag_101048-7D locus 7.7 () Automated name-based View Maps
SpringWheatNAM_tag_223399-7D locus 36.8 No other positions
SpringWheatNAM_tag_223499-7D locus 36.8 No other positions
SpringWheatNAM_tag_221347-7D locus 36.8 No other positions
SpringWheatNAM_tag_220116-7D locus 36.8 No other positions
SpringWheatNAM_tag_226655-7D locus 36.8 No other positions
SpringWheatNAM_tag_103225-7D locus 36.8 No other positions
SpringWheatNAM_tag_223386-7D locus 36.8 No other positions
SpringWheatNAM_tag_219263-7D locus 36.8 No other positions
SpringWheatNAM_tag_220404-7D locus 36.8 No other positions
SpringWheatNAM_tag_221198-7D locus 36.8 No other positions
SpringWheatNAM_tag_231750-7D locus 36.8 No other positions
SpringWheatNAM_tag_220937-7D locus 36.8 No other positions
SpringWheatNAM_tag_224310-7D locus 36.8 No other positions
SpringWheatNAM_tag_218979-7D locus 36.8 No other positions
SpringWheatNAM_tag_220447-7D locus 36.8 No other positions
SpringWheatNAM_tag_221277-7D locus 36.8 No other positions
SpringWheatNAM_tag_221877-7D locus 36.8 No other positions
SpringWheatNAM_tag_223471-7D locus 36.8 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.