*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM8-Berkut-x-PBW343
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM8-BxPBW343_2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 [ View Map Set Info ]
Map Name: Wheat-2018-NAM8-BxPBW343_2D
Map Start: 0
Map Stop: 148.1
Features by Type:
445 locus
445 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 445.       Previous | of 18 | Next
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_2D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
SpringWheatNAM_tag_34549-2D locus 147.4 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D SpringWheatNAM_tag_34549-2D locus 87.1 () Automated name-based View Maps
SpringWheatNAM_tag_340833-2D locus 147.4 No other positions
SpringWheatNAM_tag_235671-2D locus 147.4 No other positions
SpringWheatNAM_tag_4109-2D locus 147.4 Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D SpringWheatNAM_tag_4109-2D locus 7.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D SpringWheatNAM_tag_4109-2D locus 49.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2D SpringWheatNAM_tag_4109-2D locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2D SpringWheatNAM_tag_4109-2D locus 3.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_2D SpringWheatNAM_tag_4109-2D locus 52.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2D SpringWheatNAM_tag_4109-2D locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2D SpringWheatNAM_tag_4109-2D locus 91.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2D SpringWheatNAM_tag_4109-2D locus 7.9 () Automated name-based View Maps
IAAV8184 locus 147.4 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D IAAV8184 locus 49.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D IAAV8184 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_2D IAAV8184 locus 40.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB35441 locus 47.11 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2D IAAV8184 locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D IAAV8184 locus 7.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM27-Berkut-x-PI192569 - Wheat-2018-NAM27-BxPI192569_2D IAAV8184 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2D IAAV8184 locus 91.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2D IAAV8184 locus 3.7 () Automated name-based View Maps
Kukri_c29484_637 locus 146.7 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB43716 locus 144.5 () Automated name-based View Maps
Kukri_rep_c72254_186 locus 146.7 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D Kukri_rep_c72254_186 locus 93.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB50180 locus 49.59 () Automated name-based View Maps
RAC875_c50245_765 locus 146 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D RAC875_c50245_765 locus 92.2 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB58627 locus 49.59 () Automated name-based View Maps
Kukri_c22553_60 locus 146 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D Kukri_c22553_60 locus 93.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2A Kukri_c22553_60 locus 95.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2A Kukri_c22553_60 locus 80.9 () Automated name-based View Maps
BobWhite_rep_c50828_195 locus 146 Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2A BobWhite_rep_c50828_195 locus 80.9 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB4905 locus 50.83 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2A BobWhite_rep_c50828_195 locus 113.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D BobWhite_rep_c50828_195 locus 93.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2A BobWhite_rep_c50828_195 locus 95.5 () Automated name-based View Maps
TA012840-0369 locus 146 Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2D TA012840-0369 locus 89.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2D TA012840-0369 locus 12.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2D TA012840-0369 locus 8.3 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2Dx IWB66107 locus 49.59 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D TA012840-0369 locus 10.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D TA012840-0369 locus 93.6 () Automated name-based View Maps
Excalibur_c56792_131 locus 146 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_2A IWB27678.1 locus 101.97 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D Excalibur_c56792_131 locus 92.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_2A Excalibur_c56792_131 locus 113.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_2A Excalibur_c56792_131 locus 80.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_2A Excalibur_c56792_131 locus 95.5 () Automated name-based View Maps
SpringWheatNAM_tag_27403-2D locus 146 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D SpringWheatNAM_tag_27403-2D locus 87.1 () Automated name-based View Maps
SpringWheatNAM_tag_236711-2D locus 146 No other positions
SpringWheatNAM_tag_1608-2D locus 146 Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_2D SpringWheatNAM_tag_1608-2D locus 3.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_2D SpringWheatNAM_tag_1608-2D locus 48.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_2D SpringWheatNAM_tag_1608-2D locus 3.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_2D SpringWheatNAM_tag_1608-2D locus 92.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_2D SpringWheatNAM_tag_1608-2D locus 5.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_2D SpringWheatNAM_tag_1608-2D locus 92.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_2D SpringWheatNAM_tag_1608-2D locus 19.2 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_2D SpringWheatNAM_tag_1608-2D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D SpringWheatNAM_tag_1608-2D locus 87.1 () Automated name-based View Maps
SpringWheatNAM_tag_235433-2D locus 146 No other positions
SpringWheatNAM_tag_31170-2D locus 146 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D SpringWheatNAM_tag_31170-2D locus 92.2 () Automated name-based View Maps
SpringWheatNAM_tag_237125-2D locus 146 No other positions
SpringWheatNAM_tag_238076-2D locus 146 No other positions
SpringWheatNAM_tag_235891-2D locus 146 No other positions
SpringWheatNAM_tag_317108-2D locus 146 Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_2D SpringWheatNAM_tag_317108-2D locus 87.1 () Automated name-based View Maps
SpringWheatNAM_tag_236728-2D locus 146 No other positions
SpringWheatNAM_tag_237831-2D locus 146 No other positions
SpringWheatNAM_tag_236905-2D locus 146 No other positions
SpringWheatNAM_tag_236022-2D locus 146 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.