*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat-2018-NAM8-Berkut-x-PBW343
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat-2018-NAM8-BxPBW343_6D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 [ View Map Set Info ]
Map Name: Wheat-2018-NAM8-BxPBW343_6D
Map Start: 0
Map Stop: 103.6
Features by Type:
385 locus
385 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 385.       of 16 | Next
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wsnp_BE445201D_Ta_1_1 locus 4.8 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWA167 locus 82.18 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D wsnp_BE445201D_Ta_1_1 locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D wsnp_BE445201D_Ta_1_1 locus 70.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6D wsnp_BE445201D_Ta_1_1 locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_124170-6D locus 4.8 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D SpringWheatNAM_tag_124170-6D locus 126.5 () Automated name-based View Maps
SpringWheatNAM_tag_119918-6D locus 4.8 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_119918-6D locus 70.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_119918-6D locus 72.8 () Automated name-based View Maps
SpringWheatNAM_tag_202850-6D locus 4.8 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6D SpringWheatNAM_tag_202850-6D locus 58.5 () Automated name-based View Maps
SpringWheatNAM_tag_324916-6D locus 4.8 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D SpringWheatNAM_tag_324916-6D locus 126.5 () Automated name-based View Maps
SpringWheatNAM_tag_341000-6D locus 4.8 No other positions
SpringWheatNAM_tag_3733-6D locus 4.8 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_3733-6D locus 72.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6D SpringWheatNAM_tag_3733-6D locus 55.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6D SpringWheatNAM_tag_3733-6D locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_3733-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6D SpringWheatNAM_tag_3733-6D locus 57.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM26-Berkut-x-PI185715 - Wheat-2018-NAM26-BxPI185715_6D SpringWheatNAM_tag_3733-6D locus 69.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6D SpringWheatNAM_tag_3733-6D locus 58.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_6D SpringWheatNAM_tag_3733-6D locus 44.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6D SpringWheatNAM_tag_3733-6D locus 16.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_6D SpringWheatNAM_tag_3733-6D locus 6.7 () Automated name-based View Maps
SpringWheatNAM_tag_169059-6D locus 4.8 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_169059-6D locus 72.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6D SpringWheatNAM_tag_169059-6D locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_124197-6D locus 4.8 Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6D SpringWheatNAM_tag_124197-6D locus 64.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D SpringWheatNAM_tag_124197-6D locus 126.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6D SpringWheatNAM_tag_124197-6D locus 0 () Automated name-based View Maps
SpringWheatNAM_tag_238543-6D locus 4.8 No other positions
SpringWheatNAM_tag_238724-6D locus 4.8 No other positions
SpringWheatNAM_tag_50544-6D locus 4.8 Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_6D SpringWheatNAM_tag_50544-6D locus 10.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM12-Berkut-x-CItr11223 - Wheat-2018-NAM12-BxCItr11223_6D SpringWheatNAM_tag_50544-6D locus 98.9 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_6D SpringWheatNAM_tag_50544-6D locus 51.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM2-Berkut-x-PI572692 - Wheat-2018-NAM2-BxPI572692_6D SpringWheatNAM_tag_50544-6D locus 57.2 () Automated name-based View Maps
SpringWheatNAM_tag_134078-6D locus 4.8 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6D SpringWheatNAM_tag_134078-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6D SpringWheatNAM_tag_134078-6D locus 52.7 () Automated name-based View Maps
SpringWheatNAM_tag_238396-6D locus 4.8 No other positions
SpringWheatNAM_tag_315693-6D locus 4.8 No other positions
SpringWheatNAM_tag_236492-6D locus 4.8 No other positions
SpringWheatNAM_tag_330364-6D locus 4.8 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_330364-6D locus 70.3 () Automated name-based View Maps
SpringWheatNAM_tag_98231-6D locus 4.8 Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6D SpringWheatNAM_tag_98231-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D SpringWheatNAM_tag_98231-6D locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_98231-6D locus 70.3 () Automated name-based View Maps
wsnp_BF428701D_Ta_1_1 locus 4.8 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWA458 locus 83.44 () Automated name-based View Maps
SpringWheatNAM_tag_24093-6D locus 4.8 Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6D SpringWheatNAM_tag_24093-6D locus 58.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6D SpringWheatNAM_tag_24093-6D locus 58.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_24093-6D locus 70.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6D SpringWheatNAM_tag_24093-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6D SpringWheatNAM_tag_24093-6D locus 52.7 () Automated name-based View Maps
SpringWheatNAM_tag_237088-6D locus 4.8 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_237088-6D locus 70.3 () Automated name-based View Maps
D_contig00170_262 locus 6.2 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D D_contig00170_262 locus 72.8 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_6D IWB15119 locus 82.14 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D D_contig00170_262 locus 124.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D D_contig00170_262 locus 69.6 () Automated name-based View Maps
SpringWheatNAM_tag_34780-6D locus 6.2 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D SpringWheatNAM_tag_34780-6D locus 122.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6D SpringWheatNAM_tag_34780-6D locus 58.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM24-Berkut-x-PI192147 - Wheat-2018-NAM24-BxPI192147_6D SpringWheatNAM_tag_34780-6D locus 16.6 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM20-Berkut-x-PI94567 - Wheat-2018-NAM20-BxPI94567_6D SpringWheatNAM_tag_34780-6D locus 47 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM4-Berkut-x-PI366716 - Wheat-2018-NAM4-BxPI366716_6D SpringWheatNAM_tag_34780-6D locus 58.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_6D SpringWheatNAM_tag_34780-6D locus 70.3 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6D SpringWheatNAM_tag_34780-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM5-Berkut-x-PI382150 - Wheat-2018-NAM5-BxPI382150_6D SpringWheatNAM_tag_34780-6D locus 0.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM15-Berkut-x-CItr7635 - Wheat-2018-NAM15-BxCItr7635_6D SpringWheatNAM_tag_34780-6D locus 52.1 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_34780-6D locus 72.8 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM30-Berkut-x-PI278297 - Wheat-2018-NAM30-BxPI278297_6D SpringWheatNAM_tag_34780-6D locus 139.7 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_6D SpringWheatNAM_tag_34780-6D locus 53.4 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM10-Berkut-x-PI9791 - Wheat-2018-NAM10-BxPI9791_6D SpringWheatNAM_tag_34780-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM14-Berkut-x-PI70613 - Wheat-2018-NAM14-BxPI70613_6D SpringWheatNAM_tag_34780-6D locus 10.7 () Automated name-based View Maps
SpringWheatNAM_tag_235482-6D locus 6.2 Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_235482-6D locus 72.8 () Automated name-based View Maps
SpringWheatNAM_tag_100506-6D locus 6.2 Wheat ABD - Wheat-2018-NAM3-Berkut-x-PI283147 - Wheat-2018-NAM3-BxPI283147_6D SpringWheatNAM_tag_100506-6D locus 126.5 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_6D SpringWheatNAM_tag_100506-6D locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM9-Berkut-x-Vida - Wheat-2018-NAM9-BxVida_6D SpringWheatNAM_tag_100506-6D locus 72.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.