*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_2014_90KSNP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_2014_90KSNP_5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_2014_90KSNP [ View Map Set Info ]
Map Name: Wheat_2014_90KSNP_5D
Map Start: 23.94
Map Stop: 223.97
Features by Type:
1,003 locus
1,003 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 1,003.       of 41 | Next
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
IWB45668 locus 23.94 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB45668 locus 0.00 () Automated name-based View Maps
IWB21999 locus 29.31 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB21999 locus 2.90 () Automated name-based View Maps
IWB7550 locus 32.80 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB7550 locus 4.70 () Automated name-based View Maps
IWB7425 locus 32.80 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB7425 locus 4.70 () Automated name-based View Maps
IWB12281 locus 32.80 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB12281 locus 4.70 () Automated name-based View Maps
IWB48192 locus 37.89 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB48192 locus 7.40 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5B Kukri_c89764_273 locus 58.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM1-Berkut-x-DharwarDry - Wheat-2018-NAM1-BxDharwarDry_5B Kukri_c89764_273 locus 72.60 () Automated name-based View Maps
IWB51431 locus 38.16 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB51431 locus 7.60 () Automated name-based View Maps
IWB18101.2 locus 42.84 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB18101.2 locus 10.10 () Automated name-based View Maps
IWB107 locus 45.32 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB107 locus 11.40 () Automated name-based View Maps
IWB44299.2 locus 46.54 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB44299.2 locus 12.10 () Automated name-based View Maps
IWB65830.2 locus 46.97 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB65830.2 locus 12.30 () Automated name-based View Maps
IWB17754 locus 49.11 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B IWB17754 locus 54.10 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-4B IWB17754 locus 68.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB17754 locus 13.40 () Automated name-based View Maps
Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 4B IWB17754 locus 81.20 () Automated name-based View Maps
IWA6023 locus 49.17 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWA6023 locus 13.50 () Automated name-based View Maps
IWB63123 locus 50.43 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB63123 locus 14.10 () Automated name-based View Maps
IWB780 locus 51.93 Wheat ABD - Wheat-2018-NAM8-Berkut-x-PBW343 - Wheat-2018-NAM8-BxPBW343_5A BobWhite_c15390_95 locus 2.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5D BobWhite_c15390_95 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5A BobWhite_c15390_95 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM11-Berkut-x-CItr4175 - Wheat-2018-NAM11-BxCItr4175_5A BobWhite_c15390_95 locus 2.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_5A BobWhite_c15390_95 locus 5.90 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB780 locus 14.90 () Automated name-based View Maps
IWB59364 locus 51.93 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB59364 locus 14.90 () Automated name-based View Maps
IWB5730 locus 51.93 Wheat ABD - Wheat-2018-NAM7-Berkut-x-PI565213 - Wheat-2018-NAM7-BxPI565213_5D BobWhite_s67669_117 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB5730 locus 14.90 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM17-Berkut-x-PI82469 - Wheat-2018-NAM17-BxPI82469_5D BobWhite_s67669_117 locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_5D BobWhite_s67669_117 locus 73.90 () Automated name-based View Maps
IWB17698 locus 51.93 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB17698 locus 14.90 () Automated name-based View Maps
IWB15785 locus 51.93 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB15785 locus 14.90 () Automated name-based View Maps
IWB4317 locus 52.53 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB4317 locus 15.20 () Automated name-based View Maps
IWB21805.2 locus 54.10 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB21805.2 locus 16.10 () Automated name-based View Maps
IWB41249 locus 54.10 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB41249 locus 16.10 () Automated name-based View Maps
IWA6226.2 locus 54.46 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWA6226.2 locus 16.30 () Automated name-based View Maps
IWB16038 locus 54.46 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB16038 locus 16.30 () Automated name-based View Maps
IWB49676 locus 54.52 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D IWB49676 locus 16.30 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.