*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Wheat AB, Carotenoid QTL, 2017
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_AB_2017_Carotenoid_QTL-1A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Wheat AB, Carotenoid QTL, 2017 [ View Map Set Info ]
Map Name: Wheat_AB_2017_Carotenoid_QTL-1A
Map Start: 1.2
Map Stop: 151.4
Features by Type:
20 locus
20 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 20 of 20.
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-1A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
barc158 locus 151.4 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1A Xbarc158 locus 139 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A barc158 locus 151.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A barc158 locus 90.3 () Automated name-based View Maps
IWB75215 locus 150.2 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB75215 locus 150.2 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB75215 locus 155.8 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 1A IWB75215 locus 130.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB75215 locus 89.7 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB75215 locus 181 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 1A3 IWB75215 locus 1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB75215 locus 181.85 (cM) Automated name-based View Maps
IWB31719 locus 139.9 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB31719 locus 139.74 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB31719 locus 175.8 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB31719 locus 139.9 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 1A IWB31719 locus 116.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB31719 locus 163.93 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB31719 locus 80.9 () Automated name-based View Maps
dupw38 locus 115.5 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A dupw38 locus 65.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-1A XDuPw038 locus 127.6 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A dupw38 locus 115.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A dupw38 locus 133.25 (cM) Automated name-based View Maps
cfa2147 locus 122.7 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-1B Xcfa2147a locus 160.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B cfa2147 locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfa2147 locus 88.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cfa2147 locus 77.8 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A cfa2147 locus 122.7 () Automated name-based View Maps
gwm99 locus 127.4 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A gwm99 locus 127.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A gwm99 locus 78.8 () Automated name-based View Maps
IWB10668 locus 100.8 Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 1A IWB10668 locus 117.9 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB10668 locus 100.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB10668 locus 114.06 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB10668 locus 56.3 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 1A IWB10668 locus 95.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB10668 locus 105.74 () Automated name-based View Maps
wmc304 locus 93.6 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A wmc304 locus 93.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wmc304 locus 50.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A wmc304 locus 103 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1A Xwmc304 locus 52 () Automated name-based View Maps
IWB56353 locus 80.2 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB56353 locus 45.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB56353 locus 91.7 (cM) Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB56353 locus 86.9 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB56353 locus 80.2 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 1A IWB56353 locus 95.9 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB56353 locus 83.7 () Automated name-based View Maps
cfa2129 locus 67.7 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B cfa2129 locus 57.3 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A cfa2129 locus 67.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfa2129 locus 51 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1A Xcfa2129 locus 83 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 cfa2129 locus 92.28 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cfa2129 locus 38.7 () Automated name-based View Maps
IWB72019 locus 59.7 Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 1A_2 IWB72019 locus 8.8 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB72019 locus 61.8 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB72019 locus 73.57 () Automated name-based View Maps
Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 1A IWB72019 locus 14.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB72019 locus 68.46 (cM) Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB72019 locus 59.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB72019 locus 33.8 () Automated name-based View Maps
cfd59 locus 46.1 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B cfd59 locus 36.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfd59 locus 27.2 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xcfd59-1A locus 126.9 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A cfd59 locus 46.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cfd59 locus 23.5 () Automated name-based View Maps
wmc469 locus 46.1 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A wmc469 locus 46.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wmc469 locus 24.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D wmc469 locus 46.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xwmc469-1A locus 63.8 () Automated name-based View Maps
gwm469 locus 43.5 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A gwm469 locus 43.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A gwm469 locus 23.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6D gwm469 locus 24.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D gwm469 locus 93.9 () Automated name-based View Maps
CRTISO-A1 locus 43.3 No other positions
IWB34631 locus 43.3 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB34631 locus 66.31 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB34631 locus 43.3 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 1A IWB34631 locus 44.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB34631 locus 23.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB34631 locus 48.07 (cM) Automated name-based View Maps
gwm772 locus 31.2 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A gwm772 locus 20.8 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A gwm772 locus 31.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A gwm772 locus 42.26 (cM) Automated name-based View Maps
IWB7089 locus 19.8 Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 1B IWB7089 locus 12.8 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 1A IWB7089 locus 13.7 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1B IWB7089 locus 12 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B IWB7089 locus 24.3 () Automated name-based View Maps
Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 1B_ IWB7089 locus 41.2 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB7089 locus 19.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB7089 locus 13.1 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB7089 locus 38.11 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 1B IWB7089 locus 3.3 () Automated name-based View Maps
Wheat AB - Wheat_AB, Mohawk x Cocorit69 - Wheat_AB, Mohawk x Cocorit69 1A_ IWB7089 locus 2.5 () Automated name-based View Maps
wmc818 locus 15.8 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wmc818 locus 10.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A Xwmc818-1A locus 28.9 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 1A wmc818 locus 15.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wmc818 locus 12.3 () Automated name-based View Maps
IWB525 locus 1.2 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A IWB525 locus 4.46 (cM) Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-1A IWB525 locus 1.2 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 1A1 IWB525 locus 6.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_1A IWB525 locus 13.73 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 1A_1 IWB525 locus 1 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 1A IWB525 locus 0 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 1A IWB525 locus 0 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB525 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A IWB525 locus 2.2 () Automated name-based View Maps
Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 1A_ IWB525 locus 5.2 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 1A_1 IWB525 locus 0 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.