*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat AB-Wheat AB, Carotenoid QTL, 2017
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_AB_2017_Carotenoid_QTL-5B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat AB - Wheat AB, Carotenoid QTL, 2017 [ View Map Set Info ]
Map Name: Wheat_AB_2017_Carotenoid_QTL-5B
Map Start: 0.70
Map Stop: 206.20
Features by Type:
29 locus
4 qtl
33 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 33.       of 2 | Next
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-5B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
QYI.Col-5B.3 qtl 167.50 No other positions
QYI.Col-5B.2 qtl 120.10 No other positions
QYPG.Col-5B.1 qtl 53.40 No other positions
QYI.Col-5B.1 qtl 44.00 No other positions
IWA7957 locus 206.20 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B IWA7957 locus 89.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWA7957 locus 97.20 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 2D IWA7957 locus 162.91 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWA7957 locus 217.65 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 5B IWA7957 locus 0.40 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 2B IWA7957 locus 264.59 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWA7957 locus 180.50 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 5B IWA7957 locus 179.90 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWA7957 locus 206.20 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D IWA7957 locus 51.80 () Automated name-based View Maps
Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-2B iwa7957-2B locus 131.70 () Automated name-based View Maps
barc144 locus 192.70 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B barc144 locus 192.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D barc144 locus 97.90 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 barc144 locus 112.91 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5D Xbarc144-5D locus 320.10 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5D barc144 locus 34.40 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B barc144 locus 92.70 () Automated name-based View Maps
IWB29394 locus 179.80 Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB29394 locus 179.80 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB29394 locus 161.32 () Automated name-based View Maps
Wheat AB - Wheat_AB, Mohawk x Cocorit69 - Wheat_AB, Mohawk x Cocorit69 5B_ IWB29394 locus 96.20 () Automated name-based View Maps
Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 5B_ IWB29394 locus 8.80 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB29394 locus 88.60 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 5B IWB29394 locus 158.50 () Automated name-based View Maps
wmc640 locus 167.60 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wmc640 locus 33.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D wmc640 locus 81.20 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wmc640 locus 84.00 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 3A wmc640 locus 65.50 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B wmc640 locus 167.60 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xwmc640-3A locus 43.80 () Automated name-based View Maps
IWB62049 locus 167.50 Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 5B IWB62049 locus 61.10 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB62049 locus 167.50 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 5B_3 IWB62049 locus 26.00 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB62049 locus 147.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 5B_2 IWB62049 locus 61.40 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB62049 locus 84.00 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB62049 locus 144.26 () Automated name-based View Maps
ABA2-B1 locus 157.50 No other positions
IWB64707 locus 157.50 Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 5B IWB64707 locus 124.60 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 5B_3 IWB64707 locus 10.70 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 5B_2 IWB64707 locus 54.60 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB64707 locus 137.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 5B IWB64707 locus 139.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB64707 locus 78.70 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB64707 locus 157.50 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 5B IWB64707 locus 145.00 () Automated name-based View Maps
barc232 locus 146.30 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5A barc232 locus 163.90 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 barc232 locus 128.09 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A barc232 locus 68.80 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B barc232 locus 75.00 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B barc232 locus 146.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D barc232 locus 72.50 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5B Xbarc232 locus 119.00 () Automated name-based View Maps
gwm408a locus 140.30 Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B gwm408a locus 140.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B gwm408a locus 72.90 () Automated name-based View Maps
IWB72281 locus 140.30 Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 5B IWB72281 locus 126.10 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB72281 locus 123.71 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB72281 locus 140.30 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 5B_2 IWB72281 locus 38.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 5B_3 IWB72281 locus 3.80 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB72281 locus 72.60 () Automated name-based View Maps
Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 5B IWB72281 locus 33.70 () Automated name-based View Maps
Wheat AB - Wheat_AB, Colosseo x Lloyd - Wheat_AB, Colosseo x Lloyd 5B IWB72281 locus 131.90 () Automated name-based View Maps
wmc593 locus 132.60 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xwmc593-7A locus 34.70 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B wmc593 locus 132.60 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B wmc593 locus 69.50 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wmc593 locus 14.30 () Automated name-based View Maps
IWB43483 locus 120.10 Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 5B_ IWB43483 locus 17.10 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB43483 locus 65.90 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB43483 locus 100.64 () Automated name-based View Maps
Wheat AB - Wheat_AB, Meridiano x Claudio - Wheat_AB, Meridiano x Claudio 5B IWB43483 locus 12.20 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB43483 locus 120.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 5B IWB43483 locus 115.30 () Automated name-based View Maps
BQ170159a locus 113.90 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B BQ170159a locus 64.20 () Automated name-based View Maps
IWB65106 locus 100.30 Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB65106 locus 71.24 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB65106 locus 50.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Molise Colli - Wheat_AB, Simeto x Molise Colli IWB65106 locus 49.20 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB65106 locus 100.30 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 5B IWB65106 locus 87.10 () Automated name-based View Maps
BE495277_339 locus 93.50 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B BE495277_339-5B locus 73.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B BE495277_339 locus 48.90 () Automated name-based View Maps
gwm499b locus 90.70 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B gwm499b locus 48.80 () Automated name-based View Maps
dupw205a locus 71.40 No other positions
IWA6992 locus 61.20 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWA6992 locus 38.20 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 5B_2 IWA6992 locus 23.50 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B IWA6992 locus 61.20 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWA6992 locus 61.20 () Automated name-based View Maps
Wheat ABD - Wheat, 2013 9K Consensus - Wheat, 2013 9K Consensus 5B IWA6992 locus 140.40 () Automated name-based View Maps
Wheat ABD - Wheat_2014_i9K_Ug99_PIxLMPG - Wheat_2014_i9K_Ug99_PIxLMPG_5B IWA6992 locus 26.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 5B IWA6992 locus 62.30 () Automated name-based View Maps
Wheat AB - Wheat_AB, Ben x PI41025 - Wheat_AB, Ben x PI41025 5B IWA6992 locus 55.60 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWA6992 locus 52.10 () Automated name-based View Maps
barc74 locus 55.70 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xbarc74-5B locus 56.70 () Automated name-based View Maps
Wheat AB - Durum Wheat, NSGC Lr - Durum Wheat, NSGC Lr 5B barc74 locus 55.70 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc74 locus 63.95 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B barc74 locus 37.00 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 barc74 locus 63.95 () Automated name-based View Maps
IWB57337 locus 53.40 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB57337 locus 28.40 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 5B IWB57337 locus 54.50 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB57337 locus 53.40 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 5B_2 IWB57337 locus 15.20 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB57337 locus 46.99 () Automated name-based View Maps
Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 5B_ IWB57337 locus 84.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 5B_1 IWB57337 locus 42.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Mohawk x Cocorit69 - Wheat_AB, Mohawk x Cocorit69 5B_ IWB57337 locus 14.30 () Automated name-based View Maps
IWB71274 locus 44.00 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5B IWB71274 locus 27.80 () Automated name-based View Maps
Wheat AB - Wheat_AB, Mohawk x Cocorit69 - Wheat_AB, Mohawk x Cocorit69 5B_ IWB71274 locus 5.00 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Zavitan - Wheat_AB, Svevo x Zavitan 5B IWB71274 locus 51.60 () Automated name-based View Maps
Wheat AB - Wheat_AB, W9292-260D3 x Kofa - Wheat_AB, W9292-260D3 x Kofa 5B_ IWB71274 locus 78.10 () Automated name-based View Maps
Wheat AB - Wheat_AB, Simeto x Levante - Wheat_AB, Simeto x Levante 5B_1 IWB71274 locus 29.70 () Automated name-based View Maps
Wheat AB - Wheat_AB_2015_Consensus - Wheat_AB_2015_Consensus-5B IWB71274 locus 44.00 () Automated name-based View Maps
Wheat AB - Wheat_AB, Latino x MG5323 - Wheat_AB, Latino x MG5323 5B IWB71274 locus 46.40 () Automated name-based View Maps
Wheat ABD - Wheat_2014_90KSNP - Wheat_2014_90KSNP_5B IWB71274 locus 46.36 () Automated name-based View Maps
Wheat AB - Wheat_AB, Svevo x Ciccio - Wheat_AB, Svevo x Ciccio 5B_2 IWB71274 locus 4.80 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.