*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Wheat ABD-Wheat-2014-Consensus-Ug99-Update
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 1B Wheat-2014-Consensus-Ug99-Update
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
traitlocus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 1B
Map Start: 0.00
Map Stop: 148.90
Features by Type:
108 locus
108 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 108.       Previous | of 5 | Next
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BS00010009 locus 80.00 No other positions
BS00009706 locus 78.40 No other positions
BS00003934 locus 78.40 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00003934 locus 29.90 () Automated name-based View Maps
eAGGmCTA130 locus 75.70 No other positions
cos1H locus 75.70 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1D cos1H locus 64.20 () Automated name-based View Maps
eAACmCCG96 locus 75.70 No other positions
XGluB1 locus 69.80 No other positions
BS00010536 locus 69.80 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00010536 locus 31.20 () Automated name-based View Maps
BS00010625 locus 69.30 Wheat ABD - Wheat-2018-NAM29-Berkut-x-PI220431 - Wheat-2018-NAM29-BxPI220431_1B BS00010625_51 locus 46.60 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_1B BS00010625_51 locus 60.20 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00010625 locus 31.20 () Automated name-based View Maps
BS00001414 locus 67.70 No other positions
BS00010888 locus 67.10 No other positions
BS00012456 locus 67.10 No other positions
BS00010475 locus 67.10 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00010475 locus 29.50 () Automated name-based View Maps
BS00010779 locus 67.10 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00010779 locus 29.20 () Automated name-based View Maps
Xwmc419 locus 67.10 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xwmc419 locus 42.00 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-1B Xwmc419 locus 92.90 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-4B Xwmc419 locus 44.10 () Automated name-based View Maps
eACGmCTG185 locus 65.00 No other positions
BS00012056 locus 63.70 No other positions
eAGCmCTA234 locus 63.70 No other positions
BS00001224 locus 62.50 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00001224 locus 26.90 () Automated name-based View Maps
BS00009945 locus 61.40 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00009945 locus 26.90 () Automated name-based View Maps
wPt-3451 locus 59.70 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-1B wPt-3451-1B locus 220.50 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3451 locus 63.12 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-3451 locus 45.00 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-1B wPt-3451 locus 99.30 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 wPt-3451 locus 63.12 () Automated name-based View Maps
eATTmCGG110 locus 59.70 No other positions
wPt-8168 locus 58.50 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-8168 locus 42.10 () Automated name-based View Maps
BS00003627 locus 57.90 No other positions
BS00003600 locus 57.30 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.