*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 2B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 2B
Map Start: 0
Map Stop: 181.1
Features by Type:
84 locus
84 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 84.       of 4 | Next
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BS00010393 locus 181.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3A BS00010393 locus 48.5 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00010393 locus 46.2 () Automated name-based View Maps
BS00009637 locus 181.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00009637 locus 106.3 () Automated name-based View Maps
BS00009533 locus 181.1 No other positions
BS00009901 locus 181.1 No other positions
BS00010442 locus 181.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6B BS00010442 locus 21.8 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00010442 locus 46.2 () Automated name-based View Maps
BS00010323 locus 181.1 No other positions
BS00003584 locus 180.6 No other positions
TR019 locus 180.6 No other positions
BS00010685 locus 173.9 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00010685 locus 113.3 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00010685 locus 107.9 () Automated name-based View Maps
eACGmCTG146 locus 164.3 No other positions
Xbarc159 locus 164.3 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xbarc159 locus 121 () Automated name-based View Maps
wPt-0049 locus 162.3 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B wPt-0049 locus 91.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2B wPt-0049 locus 300.8 (cM) Automated name-based View Maps
eAGCmCTA240 locus 154 No other positions
BS00009460 locus 151.5 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_2 BS00009460 locus 131.2 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00009460 locus 131.2 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00009460 locus 93.5 () Automated name-based View Maps
BS00010081 locus 150.9 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00010081 locus 98.9 () Automated name-based View Maps
BS00009519 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00009519 locus 79.5 () Automated name-based View Maps
BS00009437 locus 137.4 No other positions
BS00003673 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00003673 locus 80.9 () Automated name-based View Maps
BS00003589 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00003589 locus 80.9 () Automated name-based View Maps
BS00009864 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00009864 locus 80.9 () Automated name-based View Maps
BS00009791 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00009791 locus 79.5 () Automated name-based View Maps
BS00010640 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00010640 locus 80.9 () Automated name-based View Maps
BS00010361 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00010361 locus 114.5 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00010361 locus 80.9 () Automated name-based View Maps
BS00003597 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00003597 locus 80.9 () Automated name-based View Maps
BS00004405 locus 137.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2B BS00004405 locus 80.9 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_2 BS00004405 locus 121.68 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00004405 locus 121.68 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.