*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 2D1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 2D1
Map Start: 0
Map Stop: 96.9
Features by Type:
34 locus
34 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 34.       of 2 | Next
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2D1
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xwmc453 locus 96.9 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2A Xwmc453 locus 93.8 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-2D Xwmc453 locus 100 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-2A Xwmc453 locus 52.6 () Automated name-based View Maps
Wheat ABD - Wheat, Finch x Eltan - Wheat, Finch x Eltan 2A Xwmc453 locus 0 () Automated name-based View Maps
Xgwm102 locus 92 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-2D Xgwm102 locus 108.9 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xgwm102 locus 44 () Automated name-based View Maps
Wheat ABD - Wheat, Branched spike gene, 2009 - Wheat_BranchedSpike_2009_2D Xgwm102 locus 24.4 (cM) Automated name-based View Maps
BS00003660 locus 87.7 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00003660 locus 42.1 () Automated name-based View Maps
BS00010681 locus 87.2 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3B BS00010681 locus 45 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00010681 locus 42.1 () Automated name-based View Maps
BS00010514 locus 87.2 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00010514 locus 42.1 () Automated name-based View Maps
BS00003804 locus 83.9 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00003804 locus 40.7 () Automated name-based View Maps
BS00000002 locus 83.9 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00000002 locus 42.1 () Automated name-based View Maps
BS00009932 locus 81.7 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2D BS00009932 locus 44.6 () Automated name-based View Maps
Xwmc018 locus 78.1 No other positions
BS00021483 locus 76.9 No other positions
BS00000905 locus 76.9 No other positions
wPt-0298 locus 76.3 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D wPt-0298 locus 36.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2D wPt-0298 locus 115.2 (cM) Automated name-based View Maps
Xwmc245 locus 76.3 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-2B Xwmc245 locus 124 () Automated name-based View Maps
wPt-8330 locus 76.3 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2D wPt-8330 locus 115.2 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D wPt-8330 locus 36.1 () Automated name-based View Maps
Xbarc11 locus 72.3 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2A Xbarc11 locus 90.5 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xbarc11 locus 57 () Automated name-based View Maps
Xgwm539 locus 69.6 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xgwm539 locus 71 () Automated name-based View Maps
Wheat ABD - Wheat 2008, Corrigin x CS(T2D), C gene - Wheat-2008-Corrigin-CS(T2D)-2D Xgwm539 locus 92 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-2D Xgwm539 locus 158.6 () Automated name-based View Maps
wPt-2544 locus 66.6 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D wPt-2544 locus 55.8 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-2544 locus 43.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2D wPt-2544 locus 178 (cM) Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_2 wPt-2544 locus 43.7 () Automated name-based View Maps
wPt-3728 locus 65.9 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D wPt-3728 locus 55.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2D wPt-3728 locus 178 (cM) Automated name-based View Maps
Xcfd161 locus 65.9 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xcfd161 locus 100 () Automated name-based View Maps
wPt-9997 locus 38.9 No other positions
Xgwm132 locus 27.3 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6B Xgwm132 locus 56 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6D Xgwm132 locus 27 () Automated name-based View Maps
Xgwm296 locus 25.1 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-2D Xgwm296 locus 31 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7D Xgwm296 locus 121 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2A Xgwm296 locus 48.8 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xgwm296 locus 16 () Automated name-based View Maps
Xgwm503 locus 25.1 No other positions
Xgwm261 locus 22.6 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xgwm261 locus 22 () Automated name-based View Maps
Wheat ABD - Wheat 2008, Corrigin x CS(T2D), C gene - Wheat-2008-Corrigin-CS(T2D)-2D Xgwm261 locus 27 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-2D Xgwm261 locus 37.7 () Automated name-based View Maps
Xcfd44 locus 22.6 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2D Xcfd44 locus 90 () Automated name-based View Maps
Wheat ABD - Wheat 2008, Corrigin x CS(T2D), C gene - Wheat-2008-Corrigin-CS(T2D)-2D Xcfd44 locus 126 (cM) Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.