*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 4B1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 4B1
Map Start: 0
Map Stop: 53.7
Features by Type:
26 locus
26 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 26.       of 2 | Next
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 4B1
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
BS00009333 locus 53.7 No other positions
TR011 locus 53.7 No other positions
BS00003927 locus 53.7 No other positions
BS00003704 locus 53.7 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00003704 locus 46 () Automated name-based View Maps
Xgwm538 locus 40.6 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-4B Xgwm538 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-4B Xgwm538 locus 52.2 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4B Xgwm538 locus 56 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4D Xgwm538 locus 125 () Automated name-based View Maps
Xwmc349 locus 34.5 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-4B Xwmc349 locus 49 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4B Xwmc349 locus 62 () Automated name-based View Maps
b598mCGT140 locus 27.5 No other positions
BS00004407 locus 24.7 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00004407 locus 26.8 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00004407 locus 33.6 () Automated name-based View Maps
BS00003765 locus 23 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00003765 locus 22.6 () Automated name-based View Maps
BS00010067 locus 22.5 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00010067 locus 26.1 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00010067 locus 23.6 () Automated name-based View Maps
BS00003759 locus 22.5 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00003759 locus 24.8 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00003759 locus 23.6 () Automated name-based View Maps
BS00010409 locus 22.5 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00010409 locus 24.1 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00010409 locus 23.6 () Automated name-based View Maps
Xgwm513 locus 20.3 Wheat ABD - Wheat, Finch x Eltan - Wheat, Finch x Eltan 4B Xgwm513 locus 5.1 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-4B Xgwm513 locus 35.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-4B Xgwm513 locus 44.3 () Automated name-based View Maps
BS00009672 locus 18.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00009672 locus 15.4 () Automated name-based View Maps
BS00003858 locus 18.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00003858 locus 15.4 () Automated name-based View Maps
BS00009915 locus 17.6 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00009915 locus 41.6 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00009915 locus 18.9 () Automated name-based View Maps
BS00009530 locus 16.5 No other positions
wPt-5334 locus 14.8 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4B wPt-5334 locus 51.02 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5334 locus 51.44 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B wPt-5334 locus 37.3 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_4 wPt-5334 locus 51.44 () Automated name-based View Maps
wPt-3991 locus 14.3 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4B wPt-3991 locus 37.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3991 locus 50.78 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_4 wPt-3991 locus 50.78 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4B wPt-3991 locus 50.84 (cM) Automated name-based View Maps
Xwmc089 locus 13.7 No other positions
eAACmCGA112 locus 13.7 No other positions
Xbarc20 locus 12.5 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-7B Xbarc20 locus 115 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-4B Xbarc20 locus 31.5 () Automated name-based View Maps
BS00003646 locus 11.4 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1B BS00003646 locus 19.1 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00003646 locus 16 () Automated name-based View Maps
BS00009253 locus 10.8 No other positions
BS00010115 locus 0 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_4 BS00010115 locus 30.67 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00010115 locus 30.67 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4B BS00010115 locus 3.7 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.