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Map Set Wheat ABD-Wheat, Avalon x Cadenza
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 5A1
Map Start: 0
Map Stop: 118.7
Features by Type:
30 locus
30 Total

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Items 1 to 25 of 30.       of 2 | Next
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5A1
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm617 locus 118.7 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xgwm617 locus 129.3 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A Xgwm617 locus 140 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm617 locus 64 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 6A Xgwm617 locus 130.9 () Automated name-based View Maps
BS00000648 locus 113.1 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00000648 locus 28.7 () Automated name-based View Maps
BS00000435 locus 107.2 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00000435 locus 22.97 () Automated name-based View Maps
BS00009531 locus 104 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5B BS00009531 locus 42.15 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00009531 locus 19.77 () Automated name-based View Maps
BS00003746 locus 104 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00003746 locus 19.4 () Automated name-based View Maps
BS00009658 locus 104 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00009658 locus 22.97 () Automated name-based View Maps
Xgwm186 locus 95.2 Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5A Xgwm186 locus 64.6 () Automated name-based View Maps
Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xgwm186 locus 95.6 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm186 locus 53 () Automated name-based View Maps
Xgwm595 locus 95.2 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xgwm595 locus 237.2 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm595 locus 101 () Automated name-based View Maps
BS00000373 locus 92.5 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00000373 locus 9 () Automated name-based View Maps
BS00015653 locus 89.8 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00015653 locus 10.7 () Automated name-based View Maps
b598mCGT235 locus 86.9 No other positions
eACTmCAC250 locus 85.4 No other positions
Xgwm156 locus 84 Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-5A Xgwm156 locus 39.3 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xgwm156 locus 40 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5A Xgwm156 locus 54.8 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm156 locus 51 () Automated name-based View Maps
BS00000645 locus 82.9 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00000645 locus 5.3 () Automated name-based View Maps
BS00005311 locus 81.8 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-5A BS00005311 locus 5.3 () Automated name-based View Maps
wPt-3620 locus 77.1 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A wPt-3620 locus 19.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5A wPt-3620 locus 43.45 (cM) Automated name-based View Maps
Xgwm293 locus 77.1 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm293 locus 27 () Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-5A Xgwm293 locus 32.6 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 5D Xgwm293 locus 43.1 () Automated name-based View Maps
wPt-3794 locus 76 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-3794 locus 2.77 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-5A AX-95158257 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-3794 locus 1.1 () Automated name-based View Maps
Xwmc150 locus 76 Wheat ABD - Wheat, Nanda2419 x Wangshuibai - Ta-NxW-5A Xwmc150 locus 70.1 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 7D1 Xwmc150 locus 39.1 () Automated name-based View Maps
wPt-4131 locus 73.4 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 wPt-4131 locus 41.97 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A wPt-4131 locus 21.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-5A wPt-4131 locus 48.08 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-4131 locus 41.97 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-5A wPt-4131-5A locus 49.5 () Automated name-based View Maps
Xwmc489 locus 69.5 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 3A Xwmc489 locus 66.5 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2B Xwmc489 locus 12.9 () Automated name-based View Maps
cos5F locus 66.6 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update cos5F locus 11.59 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_5 cos5F locus 11.59 () Automated name-based View Maps
b598mCGT215 locus 63.1 No other positions
Xgwm595b locus 59.8 No other positions
Xgwm129 locus 58.5 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2B Xgwm129 locus 77 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-5A Xgwm129 locus 27 () Automated name-based View Maps

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