*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Avalon x Cadenza
(Reference Set)
Wheat ABD-Wheat, Composite, 2004
Min.
Correspondences
Align Vertically
Stack
Maps Wheat, Avalon x Cadenza 6A Wheat-Composite2004-6A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Avalon x Cadenza [ View Map Set Info ]
Map Name: Wheat, Avalon x Cadenza 6A
Map Start: 0.00
Map Stop: 155.70
Features by Type:
67 locus
67 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 67.       of 3 | Next
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 6A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wPt-9382 locus 0.00 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9382 locus 51.88 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-9382 locus 0.30 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 wPt-9382 locus 51.88 () Automated name-based View Maps
wPt-1664 locus 0.00 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1664 locus 51.88 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 wPt-1664 locus 51.88 () Automated name-based View Maps
b598mCGT205 locus 8.30 No other positions
Xgwm334 locus 15.30 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-6A Xgwm334 locus 28.00 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-6A Xgwm334 locus 16.10 () Automated name-based View Maps
BS00012414 locus 21.50 Wheat ABD - Wheat-2018-NAM6-Berkut-x-PI470817 - Wheat-2018-NAM6-BxPI470817_6A BS00012414_51 locus 55.30 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM19-Berkut-x-PI43355 - Wheat-2018-NAM19-BxPI43355_6A BS00012414_51 locus 18.70 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM13-Berkut-x-PI262611 - Wheat-2018-NAM13-BxPI262611_6B BS00012414_51 locus 8.90 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00012414 locus 12.20 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM16-Berkut-x-PI8813 - Wheat-2018-NAM16-BxPI8813_6A BS00012414_51 locus 9.00 () Automated name-based View Maps
Wheat ABD - Wheat-2018-NAM18-Berkut-x-CItr15144 - Wheat-2018-NAM18-BxCItr15144_6A BS00012414_51 locus 289.30 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6B BS00012414 locus 6.50 () Automated name-based View Maps
BS00012150 locus 22.00 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00012150 locus 12.20 () Automated name-based View Maps
BS00003632 locus 22.00 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00003632 locus 12.20 () Automated name-based View Maps
BS00004278 locus 22.00 No other positions
BS00009759 locus 22.00 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00009759 locus 12.20 () Automated name-based View Maps
eACTmCGG285 locus 42.20 No other positions
wPt-9690 locus 47.40 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-9690 locus 14.60 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9690 locus 85.96 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 wPt-9690 locus 85.96 () Automated name-based View Maps
wPt-2573 locus 48.00 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 wPt-2573 locus 85.96 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-2573 locus 14.60 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-2573 locus 85.96 () Automated name-based View Maps
wPt-7127 locus 49.30 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-7127 locus 16.70 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7127 locus 85.96 () Automated name-based View Maps
BS00009584 locus 51.80 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00009584 locus 12.20 () Automated name-based View Maps
BS00003635 locus 51.80 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00003635 locus 12.20 () Automated name-based View Maps
BS00003861 locus 53.90 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00003861 locus 12.20 () Automated name-based View Maps
Xbarc23 locus 53.90 No other positions
BS00009746 locus 53.90 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00009746 locus 12.20 () Automated name-based View Maps
BS00009664 locus 53.90 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00009664 locus 12.20 () Automated name-based View Maps
eATTmCGG100 locus 55.30 No other positions
wPt-8833 locus 57.90 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8833 locus 89.43 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-8833 locus 18.60 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 wPt-8833 locus 89.43 () Automated name-based View Maps
wPt-3091 locus 58.50 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3091 locus 89.43 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6 wPt-3091 locus 89.43 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-3091 locus 18.60 () Automated name-based View Maps
BS00001037 locus 65.20 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00001037 locus 22.20 () Automated name-based View Maps
BS00009376 locus 66.90 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00009376 locus 23.00 () Automated name-based View Maps
wPt-7063 locus 68.10 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-7063 locus 30.30 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.