*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat C-bands
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-Cyto-5D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
chromband
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat C-bands [ View Map Set Info ]
Map Name: CS-Cyto-5D
Map Start: -3.60
Map Stop: 6.80
Features by Type:
14 chromband
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Wheat ABD - Wheat C-bands - CS-Cyto-5D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
5DS1.6 chromband -3.30 - -2.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DS1.6 chromband -3.30 - -2.10 () Automated name-based View Maps
5DS1.2 chromband -0.90 - 0.00 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DS1.2 chromband -0.90 - 0.00 () Automated name-based View Maps
Cent-5D chromband -0.05 - 0.05 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D Cent-5D chromband -0.05 - 0.05 () Automated name-based View Maps
5DL1.4 chromband 1.10 - 3.70 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.4 chromband 1.10 - 3.70 () Automated name-based View Maps
5DL1.61 chromband 3.90 - 6.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.61 chromband 3.90 - 6.10 () Automated name-based View Maps
5DS1.3 chromband -1.30 - -0.90 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DS1.3 chromband -1.30 - -0.90 () Automated name-based View Maps
5DS1.4 chromband -2.00 - -1.30 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DS1.4 chromband -2.00 - -1.30 () Automated name-based View Maps
5DS1.5 chromband -2.10 - -2.00 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DS1.5 chromband -2.10 - -2.00 () Automated name-based View Maps
5DS1.7 chromband -3.60 - -3.30 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DS1.7 chromband -3.60 - -3.30 () Automated name-based View Maps
5DL1.2 chromband 0.00 - 1.00 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.2 chromband 0.00 - 1.00 () Automated name-based View Maps
5DL1.3 chromband 1.00 - 1.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.3 chromband 1.00 - 1.10 () Automated name-based View Maps
5DL1.5 chromband 3.70 - 3.90 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.5 chromband 3.70 - 3.90 () Automated name-based View Maps
5DL1.62 chromband 6.10 - 6.20 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.62 chromband 6.10 - 6.20 () Automated name-based View Maps
5DL1.63 chromband 6.20 - 6.80 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-5D 5DL1.63 chromband 6.20 - 6.80 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.