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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat C-bands
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS-Cyto-1B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
chromband
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat C-bands [ View Map Set Info ]
Map Name: CS-Cyto-1B
Map Start: -4.6
Map Stop: 7.4
Features by Type:
30 chromband
30 Total

Map Features

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Items 1 to 25 of 30.       of 2 | Next
Wheat ABD - Wheat C-bands - CS-Cyto-1B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
1BSAT2.5 chromband -3.5 - -3.3 No other positions
1BSAT3.1 chromband -3.8 - -3.5 No other positions
1BSAT3.2 chromband -4 - -3.8 No other positions
1BSAT3.3 chromband -4.3 - -4 No other positions
1BSAT3.4 chromband -4.6 - -4.3 No other positions
1BS1.2 chromband -0.1 - 0 No other positions
1BS1.3 chromband -0.5 - -0.1 No other positions
1BS1.4 chromband -0.6 - -0.5 No other positions
1BS1.5 chromband -1 - -0.6 No other positions
1BS1.6 chromband -1.6 - -1 No other positions
1BS2.1 chromband -2 - -1.6 No other positions
1BS2.2 chromband -2.5 - -2 No other positions
1BS2.3 chromband -3.1 - -2.5 No other positions
1BL1.2 chromband 0 - 0.1 No other positions
1BL1.3 chromband 0.1 - 0.7 No other positions
1BL1.4 chromband 0.7 - 0.8 No other positions
1BL1.5 chromband 0.8 - 1.2 No other positions
1BL1.6 chromband 1.2 - 1.3 No other positions
1BL1.7 chromband 1.3 - 1.7 No other positions
1BL1.8 chromband 1.7 - 1.8 No other positions
1BL2.1 chromband 1.8 - 2.3 No other positions
1BL2.2 chromband 2.3 - 3.5 No other positions
1BL2.3 chromband 3.5 - 3.9 No other positions
1BL2.4 chromband 3.9 - 4.4 No other positions
1BL2.5 chromband 4.4 - 4.6 No other positions

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