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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat C-bands
(Reference Set)
Wheat ABD-5AL, CS q deletions, physical
Min.
Correspondences
Align Vertically
Stack
Maps CS-Cyto-5A 5AL, q deletions
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Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
chromband
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat C-bands [ View Map Set Info ]
Map Name: CS-Cyto-5A
Map Start: -4.10
Map Stop: 7.40
Features by Type:
12 chromband
12 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Wheat ABD - Wheat C-bands - CS-Cyto-5A
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
5AL1.2 chromband 0.00 - 1.10 Wheat ABD - 5AL, CS q deletions, physical - 5AL, q deletions 5AL1.2 chromband 3.00 - 15.00 () Automated name-based View Maps
5AL1.3 chromband 1.10 - 1.30 Wheat ABD - 5AL, CS q deletions, physical - 5AL, q deletions 5AL1.3 chromband 15.00 - 19.00 () Automated name-based View Maps
5AL1.5 chromband 4.00 - 4.10 Wheat ABD - 5AL, CS q deletions, physical - 5AL, q deletions 5AL1.5 chromband 56.00 - 60.00 () Automated name-based View Maps
5AL1.6 chromband 4.10 - 7.40 Wheat ABD - 5AL, CS q deletions, physical - 5AL, q deletions 5AL1.6 chromband 60.00 - 100.00 () Automated name-based View Maps
5AS1.2 chromband -2.90 - 0.00 No other positions
5AS1.3 chromband -3.00 - -2.90 No other positions
5AS1.4 chromband -3.60 - -3.00 No other positions
5AS1.5 chromband -4.10 - -3.60 No other positions
5AL1.41 chromband 1.30 - 3.10 No other positions
5AL1.42 chromband 3.10 - 3.20 No other positions
5AL1.43 chromband 3.20 - 4.00 No other positions
Cent-5A chromband -0.05 - 0.05 No other positions

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