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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat C-bands
(Reference Set)
Wheat ABD-Wheat, Physical
Min.
Correspondences
Align Vertically
Stack
Maps CS-Cyto-6D Ta-Physical-Gill-6D
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
baccontig
breakpoint
breakpointinterval
chromband
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Cytogenetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat C-bands [ View Map Set Info ]
Map Name: CS-Cyto-6D
Map Start: -4.00
Map Stop: 4.80
Features by Type:
17 chromband
17 Total

Map Features

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Items 1 to 17 of 17.
Wheat ABD - Wheat C-bands - CS-Cyto-6D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
6DS1.4 chromband -2.10 - -0.70 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.4 chromband -2.10 - -0.70 () Automated name-based View Maps
Cent-6D chromband -0.05 - 0.05 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D Cent-6D chromband -0.05 - 0.05 () Automated name-based View Maps
6DL1.2 chromband 0.00 - 1.20 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.2 chromband 0.00 - 1.20 () Automated name-based View Maps
6DL1.41 chromband 1.50 - 2.50 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.41 chromband 1.50 - 2.50 () Automated name-based View Maps
6DS1.2 chromband -0.60 - 0.00 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.2 chromband -0.60 - 0.00 () Automated name-based View Maps
6DS1.3 chromband -0.70 - -0.60 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.3 chromband -0.70 - -0.60 () Automated name-based View Maps
6DS1.5 chromband -2.30 - -2.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.5 chromband -2.30 - -2.10 () Automated name-based View Maps
6DS1.6 chromband -3.10 - -2.30 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.6 chromband -3.10 - -2.30 () Automated name-based View Maps
6DS1.7 chromband -3.40 - -3.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.7 chromband -3.40 - -3.10 () Automated name-based View Maps
6DS1.8 chromband -3.80 - -3.40 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.8 chromband -3.80 - -3.40 () Automated name-based View Maps
6DS1.9 chromband -4.00 - -3.80 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DS1.9 chromband -4.00 - -3.80 () Automated name-based View Maps
6DL1.3 chromband 1.20 - 1.50 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.3 chromband 1.20 - 1.50 () Automated name-based View Maps
6DL1.42 chromband 2.50 - 2.60 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.42 chromband 2.50 - 2.60 () Automated name-based View Maps
6DL1.43 chromband 2.60 - 4.10 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.43 chromband 2.60 - 4.10 () Automated name-based View Maps
6DL1.5 chromband 4.10 - 4.20 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.5 chromband 4.10 - 4.20 () Automated name-based View Maps
6DL1.6 chromband 4.20 - 4.70 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.6 chromband 4.20 - 4.70 () Automated name-based View Maps
6DL1.7 chromband 4.70 - 4.80 Wheat ABD - Wheat, Physical - Ta-Physical-Gill-6D 6DL1.7 chromband 4.70 - 4.80 () Automated name-based View Maps

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