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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, CIMMYT Integrated
(Reference Set)
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Maps CIMMYT-integrated-5B
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, CIMMYT Integrated [ View Map Set Info ]
Map Name: CIMMYT-integrated-5B
Map Start: 0
Map Stop: 210.41
Features by Type:
62 locus
62 Total

Map Features

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Items 1 to 25 of 62.       of 3 | Next
Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-5B
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wPt3439 locus 0 No other positions
wPt6136 locus 15.97 No other positions
wPt1302 locus 16.33 No other positions
wPt9800 locus 21.31 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-7B wPt9800 locus 12.8 () Automated name-based View Maps
wPt0033 locus 24.57 No other positions
wPt7861 locus 39.35 No other positions
wPt1420 locus 41.07 No other positions
wPt9666 locus 41.07 No other positions
wPt8604 locus 41.24 No other positions
wPt1261a locus 51.82 No other positions
wPt3931a locus 54.06 No other positions
wPt5346 locus 62.5 No other positions
wPt5914 locus 62.5 No other positions
wPt6348 locus 62.5 No other positions
wPt5175 locus 62.67 No other positions
wPt5688 locus 69.55 No other positions
wPt9814 locus 69.67 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-7B wPt9814 locus 56.7 () Automated name-based View Maps
wPt6052 locus 69.93 No other positions
wPt5737 locus 69.93 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-7B wPt5737 locus 56.6 () Automated name-based View Maps
wPt2041 locus 70.12 No other positions
wPt2586 locus 71.89 No other positions
wPt1457 locus 74.9 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-7B wPt1457 locus 52.3 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5B XwPt1457-5B locus 0.1 () Automated name-based View Maps
wPt1505g locus 75.02 No other positions
wPt3569 locus 75.91 No other positions
wPt1951 locus 76.15 No other positions

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