*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Chinese Spring x SQ1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps CS/SQ1-7A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Chinese Spring x SQ1 [ View Map Set Info ]
Map Name: CS/SQ1-7A
Map Start: 0
Map Stop: 190
Features by Type:
44 locus
1 qtl
45 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 45.       of 2 | Next
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xm39p78.4-7A locus 0 No other positions
Xm21p76.14-7A locus 11 No other positions
Xwmc158-7A locus 18 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xwmc158-7A locus 5.4 () Automated name-based View Maps
Xgwm681-7A locus 19.1 No other positions
Xwmc388c-7A locus 19.1 No other positions
Xpsr563.2-7A locus 21.3 No other positions
Xm83p65.4-7A locus 21.3 No other positions
Xm69p78.1-7A locus 21.3 No other positions
Xm63p78.6-7A locus 24.6 No other positions
Xpsr386.2-7A locus 24.6 No other positions
Xm72p78.2-7A locus 25.1 No other positions
Xpsr490.3Ss1-7A locus 25.6 No other positions
Xgwm635b-7A locus 26.7 No other positions
Xm65p64.2a-7A locus 27.8 No other positions
Xpsr558-7A locus 31.1 No other positions
Xwmc479-7A locus 35.6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xwmc479-7A locus 22.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wmc479 locus 2.9 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc479 locus 7.83 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-7A Xwmc479-7A locus 15 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7 wmc479 locus 7.83 () Automated name-based View Maps
Xwmc283.1-7A locus 66.3 No other positions
Xm49p78.4-7A locus 75.6 No other positions
Xcfa2028-7A locus 76.7 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7A Xcfa2028-7A locus 97.1 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A Xcfa2028-7A locus 106.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xcfa2028-7A locus 41.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_7A Xcfa2028-7A locus -0.22 () Automated name-based View Maps
Xm49p78.7-7A locus 81.1 No other positions
Xwmc83-7A locus 86.7 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7 wmc83 locus 11.68 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7A Xwmc83-7A locus 149.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7A Xwmc83-7A locus 101.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xwmc83-7A locus 54.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wmc83 locus 20.1 () Automated name-based View Maps
Xm85p65.1-7A locus 92.3 No other positions
Xbarc174-7A locus 99.1 Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-7A barc174 locus 90 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B barc174 locus 44.5 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-7A Xbarc174-7A locus 132.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A barc174 locus 22.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-7A Xbarc174-7A locus 64 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-7A Xbarc174-7A locus 74.3 () Automated name-based View Maps
Xm21p76.12-7A locus 107.1 No other positions
Xm67p77.4-7A locus 107.1 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.