*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Conan x Reeder
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Conan/Reeder-2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Conan x Reeder [ View Map Set Info ]
Map Name: Conan/Reeder-2D
Map Start: 0
Map Stop: 156.69
Features by Type:
21 locus
1 qtl
22 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 22 of 22.
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-2D
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcfd11-2D locus 38.7 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xcfd11-2D locus 81.1 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xcfd11-2D locus -0.74 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xcfd11-2D locus 100.8 () Automated name-based View Maps
Xgwm539-2D locus 98.81 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm539-2D locus 151.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm539-2D locus 90.9 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xgwm539-2D locus 0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm539-2D locus 59.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm539-2D locus 138 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm539-2D locus 149.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm539-2D locus 117.7 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm539-2D locus 114.9 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Xgwm539-2D locus 148.8 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm539-2D locus 136.9 () Automated name-based View Maps
Xgwm349-2D locus 143.79 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xgwm349-2D locus 0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2D Xgwm349-2D locus 196.3 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm349-2D locus 194 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm349-2D locus 179.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm349-2D locus 79.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm349-2D locus 147 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm349-2D locus 93.2 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xgwm349-2D locus 237.4 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm349-2D locus 164.9 () Automated name-based View Maps
PpdD locus 0 No other positions
Xbarc168-2D locus 12.99 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xbarc168-2D locus 28.7 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2D Xbarc168-2D locus 86.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xbarc168-2D locus 46.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xbarc168-2D locus -0.74 () Automated name-based View Maps
Xgwm484-2D locus 14.89 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgwm484-2D locus 100 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xgwm484-2D locus 27.8 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm484-2D locus 53 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm484-2D locus 56.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm484-2D locus 40.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xgwm484-2D locus -0.16 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xgwm484-2D locus 77.4 () Automated name-based View Maps
XwPt0330-2D locus 28.72 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-2D wPt0330 locus 8.02 () Automated name-based View Maps
XwPt2644-2D locus 52.91 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-2D wPt2644 locus 3.26 () Automated name-based View Maps
Xwmc144-2D locus 67.26 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-2D Xwmc144-2D locus 38.6 () Automated name-based View Maps
Wheat ABD - Wheat 2008, Coda x Brundage, C gene - Wheat-2008-Coda-Brundage-2D Xwmc144-2D locus 35 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xwmc144-2D locus 67.1 () Automated name-based View Maps
Xgpw3105-2D locus 79.6 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xgpw3105-2D locus 127.3 () Automated name-based View Maps
Xwmc797.2-2D locus 94.42 No other positions
XwPt4413-2D locus 101.51 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-2D wPt4413 locus 10.69 () Automated name-based View Maps
XwPt2544-2D locus 114.05 No other positions
Xcfd62.1-2D locus 116.05 No other positions
Xcfd44-2D locus 133.37 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xcfd44-2D locus 214.3 () Automated name-based View Maps
Xwmc167-2D locus 146.26 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xwmc167-2D locus 238.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-2D Xwmc167-2D locus 204.1 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xwmc167-2D locus 97.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xwmc167-2D locus 181.6 () Automated name-based View Maps
Xbarc159-2D locus 148.9 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-2D Xbarc159-2D locus 188.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xbarc159-2D locus 0.88 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-2D Xbarc159-2D locus 80.7 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xbarc159-2D locus 101.8 () Automated name-based View Maps
Xcfd239-2D locus 152.06 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xcfd239-2D locus 94.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xcfd239-2D locus 203 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xcfd239-2D locus 0.88 () Automated name-based View Maps
Xcfd161-2D locus 152.06 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xcfd161-2D locus 94.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-2D Xcfd161-2D locus 182.8 () Automated name-based View Maps
Xcfd50-2D locus 154.39 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-2D Xcfd50-2D locus 265.6 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2D Xcfd50-2D locus 268 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xcfd50-2D locus 0.62 () Automated name-based View Maps
Xgwm320-2D locus 156.69 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-2D Xgwm320-2D locus 100.9 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2D Xgwm320-2D locus 197.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-2D Xgwm320-2D locus 147.6 () Automated name-based View Maps
Wheat ABD - Wheat, WxM, FHB QTL - Triticum-WxM-FHB-QTL-2D Xgwm320-2D locus 189.1 () Automated name-based View Maps
Wheat ABD - Wheat 2008, Corrigin x CS(T2D), C gene - Wheat-2008-Corrigin-CS(T2D)-2D Xgwm320-2D locus 157 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2D Xgwm320-2D locus 0.24 () Automated name-based View Maps
QCc.mst-2D qtl 98.9 - 133.4 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.