*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Consensus_2014_Ug99_Rust
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Consensus_2014_Ug99_Rust_1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Consensus_2014_Ug99_Rust [ View Map Set Info ]
Map Name: Wheat_Consensus_2014_Ug99_Rust_1
Map Start: 7.22
Map Stop: 135.47
Features by Type:
40 locus
40 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 40.       of 2 | Next
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
barc149 locus 7.22 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc149 locus 7.22 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D barc149 locus 3.70 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1D Xbarc149-1D locus 0.00 () Automated name-based View Maps
SNPPMOp931433/37 locus 13.83 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp931433/37 locus 13.83 () Automated name-based View Maps
BS00028928 locus 16.22 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00028928 locus 16.22 () Automated name-based View Maps
cfd15 locus 16.22 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cfd15 locus 10.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd15-1D locus 19.50 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 cfd15 locus 19.43 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfd15 locus 8.80 () Automated name-based View Maps
gwm33 locus 16.22 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B gwm33 locus 4.20 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D gwm33 locus 8.20 () Automated name-based View Maps
cdf21 locus 21.22 No other positions
cfd21_2 locus 25.63 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfd21_2 locus 16.50 () Automated name-based View Maps
SNPPMOp123974/65 locus 25.63 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp123974/65 locus 25.63 () Automated name-based View Maps
wPt-4647 locus 31.84 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-4647 locus 31.84 () Automated name-based View Maps
cfd83 locus 31.84 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update cfd83 locus 31.84 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Xcfd83 locus 84.00 () Automated name-based View Maps
wPt-9181 locus 32.53 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9181 locus 32.53 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D wPt-9181 locus 1.40 () Automated name-based View Maps
cfd21 locus 33.40 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7 cfd21 locus 57.32 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cfd21 locus 13.30 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7D cfd21 locus 64.80 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D cfd21 locus 11.70 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xcfd21-1A locus 78.50 () Automated name-based View Maps
SNPPMOp1193489/2 locus 36.03 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp1193489/2 locus 36.03 () Automated name-based View Maps
bac119 locus 37.22 No other positions
wPt-8960 locus 37.93 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D wPt-8960 locus 18.40 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 1D wPt-8960 locus 43.70 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8960 locus 37.93 () Automated name-based View Maps
BS00103876 locus 37.93 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-1D BS00103876 locus 19.40 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00103876 locus 37.93 () Automated name-based View Maps
gwm337 locus 37.93 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D gwm337 locus 23.90 () Automated name-based View Maps
SNPPMOp1481895/60 locus 37.93 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp1481895/60 locus 37.93 () Automated name-based View Maps
barc119 locus 37.93 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D barc119 locus 21.40 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 barc119 locus 48.43 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A barc119 locus 21.60 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B barc119 locus 30.10 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 barc119 locus 46.03 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1A Xbarc119 locus 22.00 () Automated name-based View Maps
wPt-7140 locus 37.93 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7140 locus 37.93 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D wPt-7140 locus 23.10 () Automated name-based View Maps
rPt-4471 locus 37.93 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update rPt-4471 locus 37.93 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D rPt-4471 locus 23.90 () Automated name-based View Maps
wPt-5320 locus 37.93 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5320 locus 37.93 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D wPt-5320 locus 24.60 () Automated name-based View Maps
wPt-413 locus 37.93 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-413 locus 37.93 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D wPt-413 locus 25.20 () Automated name-based View Maps
wmc611b locus 39.53 No other positions
BS00102902 locus 43.31 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00102902 locus 43.31 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.