*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Consensus_2014_Ug99_Rust
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Consensus_2014_Ug99_Rust_2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Consensus_2014_Ug99_Rust [ View Map Set Info ]
Map Name: Wheat_Consensus_2014_Ug99_Rust_2
Map Start: 2.36
Map Stop: 144.04
Features by Type:
46 locus
46 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 46.       of 2 | Next
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_2
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wPt-6687 locus 2.36 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-6687 locus 2.36 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-6687 locus 71.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A wPt-6687 locus 208.88 (cM) Automated name-based View Maps
BS00022777 locus 4.36 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-2A BS00022777 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00022777 locus 4.36 () Automated name-based View Maps
wPt-7739 locus 4.96 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-7739 locus 62.8 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7739 locus 4.96 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-7739 locus 97.4 () Automated name-based View Maps
barc1147a locus 5.74 No other positions
gwm382 locus 10.33 Consensus - Leymus_2012_TTC2 - Leymus_2012_TTC2_LG2b GWM382 locus 206.73 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B gwm382 locus 88.7 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG2b GWM382 locus 179.26 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG2a GWM382 locus 172.34 () Automated name-based View Maps
Consensus - Leymus_2012_TTCC - Leymus_2012_con_LG2b GWM382 locus 201.12 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D gwm382 locus 73.7 () Automated name-based View Maps
Consensus - Leymus_2012_TTC1 - Leymus_2012_TTC1_LG2a GWM382 locus 170.9 () Automated name-based View Maps
wmc453 locus 13.95 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D wmc453 locus 24.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wmc453 locus 23.1 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-2A Xwmc453a-2A locus 89.6 () Automated name-based View Maps
gpw4474.2 locus 14.24 No other positions
wmc522 locus 16.54 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-2A Xwmc522 locus 55 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wmc522 locus 41.03 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wmc522 locus 23.2 () Automated name-based View Maps
wPt-5647 locus 22.86 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-5647 locus 2.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A wPt-5647 locus 7.28 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5647 locus 22.86 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2A wPt-5647 locus 30.9 () Automated name-based View Maps
wmc407 locus 22.86 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wmc407 locus 2.5 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc407 locus 22.86 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-2A Xwmc407-2A locus 127.6 () Automated name-based View Maps
Wheat ABD - Wheat_2014_i9K_Ug99_PIxLMPG - Wheat_2014_i9K_Ug99_PIxLMPG_2A wmc407 locus 2.4 () Automated name-based View Maps
gwm339 locus 24.61 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A gwm339 locus 27.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A gwm339 locus 80.07 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gwm339 locus 24.61 () Automated name-based View Maps
gwm275 locus 24.61 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A gwm275 locus 27.7 () Automated name-based View Maps
gwm95 locus 25.58 Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-2A gwm95-2A locus 58 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A gwm95 locus 28 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gwm95 locus 25.58 () Automated name-based View Maps
gwm372 locus 26.86 Wheat ABD - Wheat, Klein Proteo x Klein Chaja - KPxKC-2A gwm372-2A locus 58 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A gwm372 locus 29.4 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-2A gwm372 locus 107.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A gwm372 locus 85.52 (cM) Automated name-based View Maps
barc220 locus 27.83 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_2A Xbarc220-2A locus 0.42 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc220 locus 27.83 () Automated name-based View Maps
cfa2263 locus 28.81 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A cfa2263 locus 29.7 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update cfa2263 locus 28.81 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-2A Xcfa2263-2A locus 105.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A cfa2263 locus 86.34 (cM) Automated name-based View Maps
barc1150 locus 29.86 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc1150-2A locus 29.86 () Automated name-based View Maps
wPt-9951 locus 30.21 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A wPt-9951 locus 84.62 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-9951 locus 29 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9951 locus 30.21 () Automated name-based View Maps
wPt-6361 locus 31.96 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-6361 locus 31.96 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A wPt-6361 locus 68.48 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-6361 locus 23.4 () Automated name-based View Maps
BS00086365 locus 33.32 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00086365 locus 33.32 () Automated name-based View Maps
wPt-4094 locus 33.32 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-4094 locus 33.32 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2A wPt-4094 locus 51.2 () Automated name-based View Maps
wPt-3114 locus 34.56 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A wPt-3114 locus 69.62 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3114 locus 34.56 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-2A wPt-3114-2A locus 136.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-3114 locus 23.9 () Automated name-based View Maps
wPt-740658 locus 38.88 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-740658 locus 38.88 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2A wPt-740658 locus 40.49 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2A wPt-740658 locus 13.8 () Automated name-based View Maps
SyOpL2634 locus 39.26 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SyOpL2634 locus 39.26 () Automated name-based View Maps
wPt-2544 locus 43.7 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-2544 locus 43.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-2D wPt-2544 locus 178 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 2D1 wPt-2544 locus 66.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2D wPt-2544 locus 55.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.