*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Consensus_2014_Ug99_Rust
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Consensus_2014_Ug99_Rust_3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Consensus_2014_Ug99_Rust [ View Map Set Info ]
Map Name: Wheat_Consensus_2014_Ug99_Rust_3
Map Start: 0.97
Map Stop: 174.47
Features by Type:
50 locus
50 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 50.       of 2 | Next
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
barc1177 locus 0.97 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3A Xbarc1177-3A locus 126.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A barc1177 locus 184.4 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc1177 locus 85.3 () Automated name-based View Maps
gpw7080 locus 4.09 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgpw7080-3A locus -1.3 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B gpw7080 locus 5.59 () Automated name-based View Maps
barc1111 locus 6.06 Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-3B Xbarc1111-3B locus 110.4 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 barc1111 locus 67.68 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B barc1111 locus 59.6 () Automated name-based View Maps
gwm674 locus 7.63 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A gwm674 locus 34.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gwm674 locus 7.63 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A gwm674 locus 74.29 (cM) Automated name-based View Maps
barc67 locus 11.87 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-3A Xbarc67-3A locus 96.6 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A barc67 locus 65.3 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A barc67 locus 75.91 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc67 locus 11.87 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc67 locus 35.1 () Automated name-based View Maps
wPt-0476 locus 12.62 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-0476 locus 12.62 () Automated name-based View Maps
gpw4228 locus 15.04 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5A Xgpw4228-5A locus 78.7 () Automated name-based View Maps
wPt-5281 locus 18.67 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-5281 locus 41.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1B wPt-5281 locus 133.06 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-5281 locus 90.63 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wPt-5281 locus 77.2 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5281 locus 18.67 () Automated name-based View Maps
BS00000628 locus 21.57 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00000628 locus 21.57 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 3A BS00000628 locus 23.6 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-3A BS00000628 locus 0 () Automated name-based View Maps
wmc11 locus 22.53 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-3A Xwmc11-3A locus 34.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wmc11 locus 8.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wmc11 locus 24.4 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A wmc11 locus 10.5 (cM) Automated name-based View Maps
wmc428 locus 25.98 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wmc428 locus 57.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc428 locus 25.98 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3A Xwmc428 locus 85 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-3A wmc428 locus 93.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wmc428 locus 123.99 (cM) Automated name-based View Maps
wmc322 locus 27.92 Wheat ABD - 3B Physical - Physical-3B wmc322 locus 133.94 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-3A Xwmc322-3A locus 222.6 () Automated name-based View Maps
wPt-5133 locus 28.6 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 3A wPt-5133 locus 125.9 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5133 locus 28.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-5133 locus 75.5 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-5133 locus 163.36 (cM) Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3A wPt-5133-3A locus 89 () Automated name-based View Maps
cfa2076 locus 29.75 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A cfa2076 locus 75.8 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3A Xcfa2076-3A locus 97.7 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update cfa2076 locus 29.75 () Automated name-based View Maps
wPt-2748 locus 31.92 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-2748 locus 31.92 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-2748 locus 9.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-2748 locus 20.2 () Automated name-based View Maps
wPt-8855 locus 31.92 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8855 locus 31.92 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B wPt-8855 locus 5.55 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-8855 locus 9.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-8855 locus 23.3 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B wPt-8855-3B locus 25.7 () Automated name-based View Maps
wPt-7341 locus 31.92 Wheat ABD - 3B Physical - Physical-3B wPt-7341 locus 5.55 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7341 locus 31.92 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-7341 locus 9.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-7341 locus 21.32 (cM) Automated name-based View Maps
wPt-7217 locus 34.7 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-7217 locus 6.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7217 locus 34.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-7217 locus 13.54 (cM) Automated name-based View Maps
barc310 locus 34.7 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3A Xbarc310 locus 23 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc310 locus 6.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc310 locus 34.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A barc310 locus 13.22 (cM) Automated name-based View Maps
wPt-3041 locus 36.8 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-3041 locus 13.64 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-3041 locus 36.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-3041 locus 6.3 () Automated name-based View Maps
barc294 locus 37.83 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3A Xbarc294 locus 22 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc294 locus 6.9 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc294 locus 37.83 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A barc294 locus 14.85 (cM) Automated name-based View Maps
barc321 locus 38.15 Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A barc321 locus 0 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc321 locus 8.5 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3A Xbarc321.1 locus 22 () Automated name-based View Maps
wPt-8649 locus 38.25 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8649 locus 38.25 () Automated name-based View Maps
wPt-9369 locus 40.51 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-9369 locus 9.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9369 locus 40.51 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-9369 locus 19.59 (cM) Automated name-based View Maps
wPt-7992 locus 40.51 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-7992 locus 19.59 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-7992 locus 9.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7992 locus 40.51 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.