*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Consensus_2014_Ug99_Rust
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Consensus_2014_Ug99_Rust_4
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Consensus_2014_Ug99_Rust [ View Map Set Info ]
Map Name: Wheat_Consensus_2014_Ug99_Rust_4
Map Start: 0.65
Map Stop: 113.43
Features by Type:
82 locus
82 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 82.       Previous | of 4 | Next
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_4
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wPt-7001 locus 41.3 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7001 locus 41.3 () Automated name-based View Maps
wmc232 locus 46.38 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc232 locus 78.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-7B Xwmc232-7B locus 138 () Automated name-based View Maps
wPt-8078 locus 48.09 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-8078 locus 155.06 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8078 locus 48.09 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-8078 locus 72.6 () Automated name-based View Maps
wmc161_1 locus 53.75 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc161_1 locus 58.9 () Automated name-based View Maps
wmc161 locus 56.05 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5D wmc161 locus 91.1 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4A Xwmc161a locus 105 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc161 locus 57.4 () Automated name-based View Maps
BS00011939 locus 56.05 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4A BS00011939 locus 63.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00011939 locus 56.05 () Automated name-based View Maps
BS00022837 locus 56.05 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4A BS00022837 locus 67.7 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00022837 locus 56.05 () Automated name-based View Maps
BS00018651 locus 56.05 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4A BS00018651 locus 72.8 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00018651 locus 56.05 () Automated name-based View Maps
BS00023220 locus 56.05 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00023220 locus 56.05 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4A BS00023220 locus 80.6 () Automated name-based View Maps
wPt-1091 locus 58.56 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-1091 locus 148.38 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1091 locus 58.56 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-1091 locus 69.4 () Automated name-based View Maps
SNPPMOp10698/14 locus 60.65 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp10698/14 locus 60.65 () Automated name-based View Maps
PAPMM6100799 locus 60.65 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update PAPMM6100799 locus 60.65 () Automated name-based View Maps
BS00021957 locus 64.58 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00021957 locus 64.58 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-4A BS00021957 locus 87.2 () Automated name-based View Maps
wPt-6997 locus 67.01 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-6997 locus 67.01 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-6997 locus 70.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-6997 locus 151.04 (cM) Automated name-based View Maps
wPt-5857 locus 67.01 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-5857 locus 151.04 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-5857 locus 70.7 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5857 locus 67.01 () Automated name-based View Maps
wPt-9196 locus 68.4 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9196 locus 68.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-9196 locus 79.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-9196 locus 169.47 (cM) Automated name-based View Maps
wPt-1743 locus 68.73 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-1743 locus 169.86 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-1743 locus 79.5 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1743 locus 68.73 () Automated name-based View Maps
wPt-5124 locus 69.01 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-5124 locus 71.5 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5124 locus 69.01 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wPt-5124 locus 152.75 (cM) Automated name-based View Maps
wmc283 locus 69.05 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wmc283 locus 15.1 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7 wmc283 locus 44.37 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc283 locus 62.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc283.2-4A locus 75.4 () Automated name-based View Maps
SyOpL2079 locus 69.91 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SyOpL2079 locus 69.91 () Automated name-based View Maps
barc78 locus 70.68 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xbarc78-4A locus 44.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc78 locus 70.68 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A barc78 locus 78.8 () Automated name-based View Maps
wmc313 locus 70.68 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A wmc313 locus 199.8 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc313 locus 70.68 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wmc313 locus 93.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-4A Xwmc313-4A locus 29.2 () Automated name-based View Maps
barc327 locus 72.65 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-4A barc327 locus 177.11 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A barc327 locus 82.9 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-4A Xbarc327 locus 152 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc327 locus 72.65 () Automated name-based View Maps
gwm350 locus 73.29 No other positions
BS00039766 locus 73.39 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00039766 locus 73.39 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.