*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Consensus_2014_Ug99_Rust
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Consensus_2014_Ug99_Rust_6
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Consensus_2014_Ug99_Rust [ View Map Set Info ]
Map Name: Wheat_Consensus_2014_Ug99_Rust_6
Map Start: 8.6
Map Stop: 219
Features by Type:
54 locus
54 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 54.       of 3 | Next
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_6
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wmc417_1 locus 8.6 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wmc417_1 locus 62.7 () Automated name-based View Maps
wmc570 locus 26.2 Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2D AX-95631062 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc570 locus 26.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wmc570 locus 140.88 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wmc570 locus 50 () Automated name-based View Maps
BS00011125 locus 45.04 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00011125 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00011125 locus 45.04 () Automated name-based View Maps
PAPMM6137386 locus 51.2 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update PAPMM6137386 locus 51.2 () Automated name-based View Maps
wPt-1664 locus 51.88 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 6A wPt-1664 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1664 locus 51.88 () Automated name-based View Maps
wPt-9382 locus 51.88 Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2A AX-94692370 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-9382 locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-9382 locus 0.92 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9382 locus 51.88 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 6A wPt-9382 locus 0 () Automated name-based View Maps
wPt-0832 locus 54.35 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-0832 locus 54.35 () Automated name-based View Maps
wPt-7475 locus 54.68 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-7475 locus 0.71 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-7475 locus 0.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7475 locus 54.68 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2A AX-94866118 locus (cM) Automated name-based View Maps
wPt-1377 locus 54.68 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1377 locus 54.68 () Automated name-based View Maps
BS00083630 locus 55.92 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00083630 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00083630 locus 55.92 () Automated name-based View Maps
wPt-669498 locus 60.35 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-669498 locus 60.35 () Automated name-based View Maps
gwm334 locus 65 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gwm334 locus 65 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-95003644 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A gwm334 locus 15.13 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A gwm334 locus 5.4 () Automated name-based View Maps
Wheat ABD - Wheat_2014_i9K_Ug99_PIxLMPG - Wheat_2014_i9K_Ug99_PIxLMPG_6A gwm334 locus 6.1 () Automated name-based View Maps
BS00010933 locus 65 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00010933 locus 65 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-6A BS00010933 locus 12.2 () Automated name-based View Maps
wPt-7623 locus 65 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-7623 locus 36.66 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-95630329 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7623 locus 65 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-7623 locus 13 () Automated name-based View Maps
wPt-6520 locus 65 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-6520 locus 12.3 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-6520 locus 4.4 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-94427128 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-6520 locus 65 () Automated name-based View Maps
SNPPMOp10333/21 locus 65 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp10333/21 locus 65 () Automated name-based View Maps
wPt-4016 locus 65 Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-94583610 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-4016 locus 4.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-4016 locus 12.3 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-4016 locus 65 () Automated name-based View Maps
wPt-8266 locus 78.21 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-8266 locus 23.67 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-94437617 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-8266 locus 8.4 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8266 locus 78.21 () Automated name-based View Maps
wPt-2573 locus 85.96 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-2573 locus 41.11 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-95155035 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-2573 locus 85.96 () Automated name-based View Maps
Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 6A wPt-2573 locus 48 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-2573 locus 14.6 () Automated name-based View Maps
wPt7127 locus 85.96 Wheat ABD - Wheat, CIMMYT Integrated - CIMMYT-integrated-6A wPt7127 locus 47.48 () Automated name-based View Maps
wPt-9690 locus 85.96 Wheat ABD - Wheat, Avalon x Cadenza - Wheat, Avalon x Cadenza 6A wPt-9690 locus 47.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-9690 locus 41.11 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-9690 locus 14.6 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-94713207 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9690 locus 85.96 () Automated name-based View Maps
gpw3087 locus 87.69 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_6A Xgpw3087-6A locus -0.82 () Automated name-based View Maps
wPt-0959 locus 88.72 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-0959 locus 17.8 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-0959 locus 88.72 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-0959 locus 50.18 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-95097906 locus (cM) Automated name-based View Maps
wPt-7599 locus 89.08 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-7599 locus 19.6 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-94474483 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-7599 locus 55.37 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7599 locus 89.08 () Automated name-based View Maps
wPt-0357 locus 89.43 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-6A wPt-0357 locus 52.58 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-0357 locus 89.43 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A wPt-0357 locus 18.6 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-2B AX-94927223 locus (cM) Automated name-based View Maps
Wheat AB - T. turgidum, Langdon x G18-16 - Tt-LxG-6A wPt-0357 locus 51 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.