*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat_Consensus_2014_Ug99_Rust
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Wheat_Consensus_2014_Ug99_Rust_7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat_Consensus_2014_Ug99_Rust [ View Map Set Info ]
Map Name: Wheat_Consensus_2014_Ug99_Rust_7
Map Start: 7.83
Map Stop: 203.33
Features by Type:
74 locus
74 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 74.       of 3 | Next
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_7
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
wmc479 locus 7.83 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wmc479 locus 2.9 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7A Xwmc479-7A locus 35.6 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc479 locus 7.83 () Automated name-based View Maps
gwm635a locus 10.55 No other positions
BS00022406 locus 10.55 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00022406 locus 10.55 () Automated name-based View Maps
Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-7A BS00022406 locus 1.3 () Automated name-based View Maps
BS00022082 locus 10.55 Wheat ABD - Wheat_2017_LRC - Wheat_2017_LRC-7A BS00022082 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update BS00022082 locus 10.55 () Automated name-based View Maps
wmc83 locus 11.68 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wmc83 locus 20.1 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-7A Xwmc83-7A locus 86.7 () Automated name-based View Maps
wPt-672171 locus 13.45 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-672171 locus 1.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-672171 locus 2.94 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-5A AX-94926419 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-672171 locus 13.45 () Automated name-based View Maps
wPt-8043 locus 13.55 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8043 locus 13.55 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-4D AX-94842798 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-8043 locus 0.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-8043 locus 1.48 (cM) Automated name-based View Maps
gwm332 locus 13.6 Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-6A AX-94553923 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A gwm332 locus 86.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A gwm332 locus 215.58 (cM) Automated name-based View Maps
wPt-2371 locus 13.95 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A wPt-2371 locus 92.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-2371 locus 1.6 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-2371 locus 13.95 () Automated name-based View Maps
barc1004 locus 14.13 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc1004 locus 14.13 () Automated name-based View Maps
barc70 locus 14.55 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 4A barc70 locus 78.7 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-7A Xbarc70-7A locus 36.2 () Automated name-based View Maps
barc22 locus 14.79 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-7A Xbarc22-7A locus 90.64 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update barc22 locus 14.79 () Automated name-based View Maps
wPt-9207 locus 15.24 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-9207 locus 15.24 () Automated name-based View Maps
gpw3127 locus 15.36 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update gpw3127 locus 15.36 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-7A Xgpw3127-7A locus 201.2 () Automated name-based View Maps
wPt-7448 locus 17.26 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7448 locus 17.26 () Automated name-based View Maps
wPt-1639 locus 17.26 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-1639 locus 17.26 () Automated name-based View Maps
wPt-6668 locus 20.06 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-6668 locus 0.2 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-6668 locus 20.06 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-4D AX-95236250 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-6668 locus 0.39 (cM) Automated name-based View Maps
SNPPMOp1069993/13 locus 20.17 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp1069993/13 locus 20.17 () Automated name-based View Maps
wPt-4748 locus 20.17 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-4748 locus 20.17 () Automated name-based View Maps
wPt742244 locus 20.17 No other positions
SNPPMOp410647/16 locus 21.77 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SNPPMOp410647/16 locus 21.77 () Automated name-based View Maps
SyOpL1199 locus 22.47 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update SyOpL1199 locus 22.47 () Automated name-based View Maps
wPt-6013 locus 23.32 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-6013 locus 57.3 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-6013 locus 23.32 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-6013 locus 142.58 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-5D AX-94916242 locus (cM) Automated name-based View Maps
wPt-5558 locus 23.32 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-5558 locus 23.32 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-5558 locus 142.58 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-5558 locus 57.3 () Automated name-based View Maps
Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-5D AX-95023534 locus (cM) Automated name-based View Maps
wPt-4553 locus 23.69 Wheat ABD - Wheat, Axiom 2018, Consensus - Wheat-Axiom2018-Cons-6A AX-95166145 locus (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 7A wPt-4553 locus 74.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-7A wPt-4553 locus 185.49 (cM) Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-4553 locus 23.69 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.