*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-1A
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-1A
Map Start: 0
Map Stop: 126
Features by Type:
45 locus
45 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 45.       of 2 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1A
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc148-1A locus 56.8 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xbarc148-1A locus 47.5 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xbarc148-1A locus 47.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc148-1A locus 33.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc148-1A locus -0.24 () Automated name-based View Maps
Xwmc278-1A locus 61.7 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xwmc278-1A locus 53.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc278-1A locus 61.6 () Automated name-based View Maps
Xgwm99-1A locus 126 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm99-1A locus 107.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Xgwm99-1A locus 120.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm99-1A locus 0.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm99-1A locus 139.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm99-1A locus 111 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xgwm99-1A locus 129.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xgwm99-1A locus 187.31 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm99-1A locus 153.1 () Automated name-based View Maps
Xwmc59-1A locus 98 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc59-1A locus 140.7 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1A Xwmc59-1A locus 130.6 () Automated name-based View Maps
Xgwm136-1A locus 11.6 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm136-1A locus -58.6 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xgwm136-1A locus 34.4 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1A Xgwm136-1A locus 173.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Xgwm136-1A locus 88.1 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm136-1A locus 53.6 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Xgwm136-1A locus 29.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm136-1A locus 3.9 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xgwm136-1A locus 13.24 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm136-1A locus -0.66 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm136-1A locus 5.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm136-1A locus 5.7 () Automated name-based View Maps
Xwmc818-1A locus 28.9 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xwmc818-1A locus 22.17 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-1A wmc818 locus 15.8 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B wmc818 locus 10.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wmc818 locus 12.3 () Automated name-based View Maps
Xwmc95-1A locus 40.5 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xwmc95-1A locus 23.8 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xwmc95-1A locus 36.32 () Automated name-based View Maps
Xbarc83-1A locus 47.6 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc83-1A locus 0.39 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xbarc83-1A locus 75.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A barc83 locus 29.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A barc83 locus 60.58 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc83-1A locus 82.03 () Automated name-based View Maps
Xcfa2129-1A locus 70.8 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1A Xcfa2129-1A locus 96.6 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xcfa2129-1A locus 90.32 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xcfa2129-1A locus 91.6 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xcfa2129-1A locus 102 () Automated name-based View Maps
Xbarc17-1A locus 114.8 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc17-1A locus 126.4 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xbarc17-1A locus 153.5 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1A Xbarc17-1A locus 140 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xbarc17-1A locus 0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1A Xbarc17-1A locus 155.9 () Automated name-based View Maps
Xgdm33-1A locus 6.1 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Xgdm33-1A locus 1 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgdm33-1A locus 42.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgdm33-1A locus -5.1 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xgdm33-1A locus 0 () Automated name-based View Maps
Xcfd15-1A locus 24.6 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xcfd15-1A locus 25 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1A Xcfd15-1A locus 15.1 () Automated name-based View Maps
Xcfa2219-1A locus 124.1 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xcfa2219-1A locus 0.5 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1A Xcfa2219-1A locus 153.8 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xcfa2219-1A locus 118 () Automated name-based View Maps
Xgwm33-1A locus 27.4 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-1A Xgwm33-1A locus 31.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm33-1A locus 16.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm33-1A locus 16.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm33-1A locus 16.9 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm33-1A locus 47.9 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-1A Xgwm33-1A locus 15.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm33-1A locus -0.93 () Automated name-based View Maps
Xcfa2226-1A locus 23.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xcfa2226-1A locus 34.7 () Automated name-based View Maps
Xwmc24-1A locus 48.4 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1A Xwmc24-1A locus 38.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xwmc24-1A locus 39.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xwmc24-1A locus 35.3 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc24-1A locus 43.3 () Automated name-based View Maps
Xgwm164-1A locus 56.3 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm164-1A locus 42.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm164-1A locus -4.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm164-1A locus 46.4 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm164-1A locus 0.08 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm164-1A locus 40.5 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xgwm164-1A locus 63.7 () Automated name-based View Maps
Xgwm357-1A locus 51.6 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm357-1A locus 7.3 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1A Xgwm357-1A locus 54.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm357-1A locus 53.3 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm357-1A locus 0.39 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm357-1A locus 54 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm357-1A locus 48.2 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xgwm357-1A locus 86 () Automated name-based View Maps
Xgwm135-1A locus 60.7 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm135-1A locus 57.45 () Automated name-based View Maps
Wheat A - T. boeoticum x monococcum - T.b.xT.m.-1A Xgwm135-1A locus 135.9 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xgwm135-1A locus 76.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm135-1A locus 56.2 () Automated name-based View Maps
Wheat A - Wheat, 2012, Brittle culm - Wheat_Brittle_culm_2012-1A Xgwm135-1A locus 10.3 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm135-1A locus 55.2 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm135-1A locus 0.39 () Automated name-based View Maps
Xwmc93-1A locus 68.8 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xwmc93-1A locus 66 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1A Xwmc93-1A locus 96.1 () Automated name-based View Maps
Xgwm497-1A locus 85.5 Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-1A Xgwm497-1A locus 78.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1A Xgwm497-1A locus 86.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-1A Xgwm497-1A locus 113.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1A Xgwm497-1A locus 108.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xgwm497-1A locus 81.2 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xgwm497-1A locus 118 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1A Xgwm497-1A locus 0.08 () Automated name-based View Maps
Xbarc119-1A locus 53.6 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1A Xbarc119-1A locus 12.3 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1A Xbarc119-1A locus 15.3 () Automated name-based View Maps
Xwmc312-1A locus 68.5 Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xwmc312-1A locus 89.3 () Automated name-based View Maps
Xwmc716-1A locus 91 Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1A Xwmc716-1A locus 113.7 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-1A Xwmc716-1A locus 118 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wmc716 locus 84.61 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A wmc716 locus 77.8 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 wmc716 locus 84.61 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-1A wmc716 locus 157.64 (cM) Automated name-based View Maps
Glu-A3 locus 0 Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update Glu-A3 locus 15.27 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1A Glu-A3 locus -59.4 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_1 Glu-A3 locus 15.27 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.