*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Consensus SSR, 2004
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-SSR-2004-1D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Consensus SSR, 2004 [ View Map Set Info ]
Map Name: Ta-SSR-2004-1D
Map Start: 0.00
Map Stop: 117.00
Features by Type:
53 locus
53 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 53.       of 3 | Next
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xbarc149-1D locus 13.70 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xbarc149-1D locus -0.54 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1D Xbarc149-1D locus 0.00 () Automated name-based View Maps
Xwmc432-1D locus 22.50 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1D Xwmc432-1D locus 32.90 () Automated name-based View Maps
Xwmc429-1D locus 52.70 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1D Xwmc429-1D locus 93.80 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1D Xwmc429-1D locus 41.00 () Automated name-based View Maps
Xgwm642-1D locus 75.40 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-1D Xgwm642-1D locus 137.30 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-1D Xgwm642-1D locus 70.10 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm642-1D locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm642-1D locus 76.30 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm642-1D locus 125.15 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgwm642-1D locus 104.10 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xgwm642-1D locus 91.90 () Automated name-based View Maps
Xwmc222-1D locus 29.70 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1D Xwmc222-1D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwmc222-1D locus 36.00 () Automated name-based View Maps
Xbarc229-1D locus 54.30 Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1D Xbarc229-1D locus 28.69 () Automated name-based View Maps
Xgwm458-1D locus 55.30 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm458-1D locus 58.70 () Automated name-based View Maps
Wheat ABD - Wheat, Conan x Reeder - Conan/Reeder-1D Xgwm458-1D locus 30.66 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xgwm458-1D locus 61.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm458-1D locus 0.09 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgwm458-1D locus 69.70 () Automated name-based View Maps
Xgdm33-1D locus 8.30 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-1D Xgdm33-1D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgdm33-1D locus 14.70 () Automated name-based View Maps
Xgdm126-1D locus 18.80 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgdm126-1D locus 136.20 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgdm126-1D locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-1D Xgdm126-1D locus 132.20 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-1D Xgdm126-1D locus 163.40 () Automated name-based View Maps
Xgdm111-1D locus 116.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgdm111-1D locus 169.10 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-1D Xgdm111-1D locus 160.70 () Automated name-based View Maps
Xgwm106-1D locus 35.50 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm106-1D locus 25.65 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xgwm106-1D locus 19.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm106-1D locus 27.80 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm106-1D locus -0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgwm106-1D locus 38.40 () Automated name-based View Maps
Xcfd21-1D locus 28.00 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd21-1D locus 24.40 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xcfd21-1D locus -0.85 () Automated name-based View Maps
Xcfd61-1D locus 26.40 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd61-1D locus 27.30 () Automated name-based View Maps
Xcfd72-1D locus 50.60 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd72-1D locus 43.40 () Automated name-based View Maps
Xcfd59-1D locus 50.40 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd59-1D locus 44.80 () Automated name-based View Maps
Xcfd65-1D locus 52.30 Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-1D Xcfd65-1D locus 0.00 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd65-1D locus 47.50 () Automated name-based View Maps
Xcfd19-1D locus 59.50 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xcfd19-1D locus 74.70 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd19-1D locus 66.90 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xcfd19-1D locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd19-1D locus 69.20 () Automated name-based View Maps
Xcfd63-1D locus 84.10 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd63-1D locus 104.50 () Automated name-based View Maps
Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-1D Xcfd63-1D locus 119.20 () Automated name-based View Maps
Xwmc147-1D locus 16.40 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwmc147-1D locus 17.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xwmc147-1D locus 18.50 () Automated name-based View Maps
Xgwm33-1D locus 22.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgwm33-1D locus 27.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm33-1D locus 17.90 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm33-1D locus 12.20 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm33-1D locus -0.24 () Automated name-based View Maps
Xcfd15-1D locus 23.20 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xcfd15-1D locus -0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd15-1D locus 19.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xcfd15-1D locus 28.10 () Automated name-based View Maps
Xcfd92-1D locus 33.10 Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xcfd92-1D locus 42.00 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xcfd92-1D locus 45.50 () Automated name-based View Maps
Xgwm337-1D locus 48.40 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm337-1D locus 39.50 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm337-1D locus 46.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm337-1D locus -0.24 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgwm337-1D locus 58.70 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1D Xgwm337-1D locus 56.70 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-1D Xgwm337-1D locus 22.50 () Automated name-based View Maps
Xwmc216-1D locus 59.20 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xwmc216-1D locus 88.30 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-1D Xwmc216-1D locus 72.40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xwmc216-1D locus 85.90 () Automated name-based View Maps
Wheat ABD - Wheat, Louise x Penawawa - Louise/Penawawa-1D Xwmc216-1D locus 31.60 () Automated name-based View Maps
Xgwm232-1D locus 107.00 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xgwm232-1D locus 163.60 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xgwm232-1D locus 130.40 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-1D Xgwm232-1D locus 63.00 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_1D Xgwm232-1D locus 0.70 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xgwm232-1D locus 166.40 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.